Non-Coding RNA Search

rret06_e16.y1

Sequence:


               
               CTCTATCCCCACTCCCACACCCCAGTATATCCTCAGGACAACTTCCTCCCATAAGTAATT
TAAAGAGCCAAGCTATTAATAAGACATATGTAACAGAGGGTGAAAAAGGCACAGGAAAAG
GAAAGTAATTATCCTTTCCTTCTTATCCTACTCCCTTATTAAGTGCTAGAGGAAAGATAC
AAACTTTTTTGTACTAGGGACAATGGAAAAAAATAACATTAACTGAGCATATACTATGTA
CCAGGCCTTTTCCTGGTTATCTTATCCTCAAGACAACCCTGTGAAATAGGTATTATCATC
CCCTTTAAAAGACATGGAAACATTTTGCTATACAGCAGAAATTGGCGCAACTTTGTAAAT
CAACTATACTTTAATGAAAAAAAAGAAAAAAAAAgatatggaaacaacccaaatgtccat
gatgggacaaagggtaaataaaatctgttgtgtatataaactggaatattatccagcctt
aaaaaggaaggaaattctggtatatgcttacaacatggacaagacattaagacattatgc
tTAATAGCATGATAATGGGAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTATCCCCACTCCCACACCCCAGTATATCCTCAGGACAACTTCCTCCCATAAGTAATT
TAAAGAGCCAAGCTATTAATAAGACATATGTAACAGAGGGTGAAAAAGGCACAGGAAAAG
GAAAGTAATTATCCTTTCCTTCTTATCCTACTCCCTTATTAAGTGCTAGAGGAAAGATAC
AAACTTTTTTGTACTAGGGACAATGGAAAAAAATAACATTAACTGAGCATATACTATGTA
CCAGGCCTTTTCCTGGTTATCTTATCCTCAAGACAACCCTGTGAAATAGGTATTATCATC
CCCTTTAAAAGACATGGAAACATTTTGCTATACAGCAGAAATTGGCGCAACTTTGTAAAT
CAACTATACTTTAATGAAAAAAAAGAAAAAAAAAgatatggaaacaacccaaatgtccat
gatgggacaaagggtaaataaaatctgttgtgtatataaactggaatattatccagcctt
aaaaaggaaggaaattctggtatatgcttacaacatggacaagacattaagacattatgc
tTAATAGCATGATAATGGGAGAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-318, gnl|bosTau2|chr19 (952165-952443)
               

               
               31-318, gnl|Hg17|chr17 (50881093-50880480)
               

               
               31-318, gnl|Mm7|chr11 (90330453-90330713)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-318, gnl|bosTau2|chr19 (952165-952443)
               

               
               31-318, gnl|Hg17|chr17 (50881093-50880480)
               

               
               31-318, gnl|Mm7|chr11 (90330453-90330713)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	31-318, gnl\|bosTau2\|chr19 (952165-952443)
	31-318, gnl\|Hg17\|chr17 (50881093-50880480)
	31-318, gnl\|Mm7\|chr11 (90330453-90330713)