Non-Coding RNA Search

rret06_f15.y1

Sequence:


               
               GTTGAAGTCACTCAATTGCTACTTTTATCAATCATGTTTCCTCATCTTGCTATTGCTCAC
ATGTAAAAACGACATGTAATCAGTTATTCTTCCTGGCTGCTGAAATGTATGAATTGTATG
TAAAAATGTAAAAAAAAATTCATTTTCCCATTTTACAAAATTAACGTGCATGGTCTTTTC
TTTCTTGTATTTTAATCACCAAGTTGGTGTTCTAAAGACGTAGGATTACTATGAGGAATA
TATTCAAGTATTCTATCCAAACATAAATGTGGCCAGCATTATTAGTTTCGGAGTTGCCAA
AACAATACAGAACATCCTTAACTCAGTCTGTAAGAGTTTTAACCAGTGCTGAGTGGTGAA
AAAAATAGTTTCCTATCTCAAGTTAATATGGAAAATTAATACCAGTTGAGCACTTAATGT
GTTTGCATGTCTGCTGCTTAATCTCCATGTGAAAGTTAGAGATTTTTTTAACACCTTTCT
TTCTCCCATTTAAAATGGGTTCTCAGAAGCACAAGCAGAGATATTTACCTGTGGAAGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGAAGTCACTCAATTGCTACTTTTATCAATCATGTTTCCTCATCTTGCTATTGCTCAC
ATGTAAAAACGACATGTAATCAGTTATTCTTCCTGGCTGCTGAAATGTATGAATTGTATG
TAAAAATGTAAAAAAAAATTCATTTTCCCATTTTACAAAATTAACGTGCATGGTCTTTTC
TTTCTTGTATTTTAATCACCAAGTTGGTGTTCTAAAGACGTAGGATTACTATGAGGAATA
TATTCAAGTATTCTATCCAAACATAAATGTGGCCAGCATTATTAGTTTCGGAGTTGCCAA
AACAATACAGAACATCCTTAACTCAGTCTGTAAGAGTTTTAACCAGTGCTGAGTGGTGAA
AAAAATAGTTTCCTATCTCAAGTTAATATGGAAAATTAATACCAGTTGAGCACTTAATGT
GTTTGCATGTCTGCTGCTTAATCTCCATGTGAAAGTTAGAGATTTTTTTAACACCTTTCT
TTCTCCCATTTAAAATGGGTTCTCAGAAGCACAAGCAGAGATATTTACCTGTGGAAGACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-540, gnl|bosTau2|chr6 (45420986-45421531)
               

               
               1-540, gnl|Hg17|chr4 (66015593-66015060)
               

               
               1-540, gnl|Mm7|chr5 (83991913-83991390)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr6 (45420986-45421531)
               

               
               1-540, gnl|Hg17|chr4 (66015593-66015060)
               

               
               1-540, gnl|Mm7|chr5 (83991913-83991390)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	1-540, gnl\|bosTau2\|chr6 (45420986-45421531)
	1-540, gnl\|Hg17\|chr4 (66015593-66015060)
	1-540, gnl\|Mm7\|chr5 (83991913-83991390)