Non-Coding RNA Search

rret16_n13.y1

Sequence:


               
               AAAGACTGGATGGTTTTAAGAGGATGATGGTTCTTCCTCTTCCCTCTTATGCTTCGTATG
ATTCCGAGCATCACAGCTTTTCTTAAACAGTCTCTCCAGATGTCTCTATAGAACAAGAAC
CTTACAAATACATTTATATTTATGTTAATGTTGGGATGGATCTAAAGGCCACTCATTTGG
TCCCGCACATATTGTGAAATGCAGACGTTCACATCCTCCTTACGGTACTTGAGTGTCCAA
AAATGGATCACGCCAGATTATCAAATTACTGAGGTTCAGAAGGCCCATATCTTTTAATGG
GCTACTCTTTAACACTTTTTTTCCATATTGCCTATTATGTATATACTAAGGAAGATTATC
CCAAGAAAGAAATTTTTGTACCCTTTAGAGGACCTTTAAAGTTTTTATCATTTTCACTGT
GAGAGCTTTCTTCAACCCTAGCACATAGTCTTACTAAGCTCTTAAAATGTGCATAATTAT
AAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGACTGGATGGTTTTAAGAGGATGATGGTTCTTCCTCTTCCCTCTTATGCTTCGTATG
ATTCCGAGCATCACAGCTTTTCTTAAACAGTCTCTCCAGATGTCTCTATAGAACAAGAAC
CTTACAAATACATTTATATTTATGTTAATGTTGGGATGGATCTAAAGGCCACTCATTTGG
TCCCGCACATATTGTGAAATGCAGACGTTCACATCCTCCTTACGGTACTTGAGTGTCCAA
AAATGGATCACGCCAGATTATCAAATTACTGAGGTTCAGAAGGCCCATATCTTTTAATGG
GCTACTCTTTAACACTTTTTTTCCATATTGCCTATTATGTATATACTAAGGAAGATTATC
CCAAGAAAGAAATTTTTGTACCCTTTAGAGGACCTTTAAAGTTTTTATCATTTTCACTGT
GAGAGCTTTCTTCAACCCTAGCACATAGTCTTACTAAGCTCTTAAAATGTGCATAATTAT
AAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-483, gnl|bosTau2|chr2 (58207861-58207401)
               

               
               1-483, gnl|Hg17|chr2 (207481317-207481813)
               

               
               1-483, gnl|Mm7|chr1 (63992465-63992865)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-483, gnl|bosTau2|chr2 (58207861-58207401)
               

               
               1-483, gnl|Hg17|chr2 (207481317-207481813)
               

               
               1-483, gnl|Mm7|chr1 (63992465-63992865)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	1-483, gnl\|bosTau2\|chr2 (58207861-58207401)
	1-483, gnl\|Hg17\|chr2 (207481317-207481813)
	1-483, gnl\|Mm7\|chr1 (63992465-63992865)