Non-Coding RNA Search

rret20_p24.y1

Sequence:


               
               ACATATAAGTGAAATCAAATAGTATTTCTggagttcccgtcgtggcgcagtggttaacga
atctgactaggaaccatgaggttgtgggttcggtccctgcccttgctcagtgcgttgcca
tgcgctgtggtgtaggttgcagacgcggctcggatcctgcgttgctgtggctctggcgta
ggccggtggctgcagctccgattcaaccactagcctggcaacctccatatgccgtgggag
cggcccaagaaatagcAAAAAAAAAGACAAAAAAAACCAAAACAAAACAAACAGTATTTC
TTTCTCTTTCTGAATTACTTCACTTAATATAATATCTAGTTCTATCCATGTTGCTGTAAA
TGGCATTATTTTGTTCTTTTTTTATGGCTGAGTAGTATTCTAAAGGAGCTTTCTTTTCAA
TTAGCAGGAAAGTCTCTTTAAGAGTTATGTTAGggagttcccgttgtggcgcagtggtta
acgaatccgactaggaaccatgaggttgcaggttcgatccctgcccttgctcagtgggtt
aaggacccagcgttgccatgagctgtggtttaggtcgaagacatggctcggatctggcgt
tgctgtggctgtggc

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATATAAGTGAAATCAAATAGTATTTCTggagttcccgtcgtggcgcagtggttaacga
atctgactaggaaccatgaggttgtgggttcggtccctgcccttgctcagtgcgttgcca
tgcgctgtggtgtaggttgcagacgcggctcggatcctgcgttgctgtggctctggcgta
ggccggtggctgcagctccgattcaaccactagcctggcaacctccatatgccgtgggag
cggcccaagaaatagcAAAAAAAAAGACAAAAAAAACCAAAACAAAACAAACAGTATTTC
TTTCTCTTTCTGAATTACTTCACTTAATATAATATCTAGTTCTATCCATGTTGCTGTAAA
TGGCATTATTTTGTTCTTTTTTTATGGCTGAGTAGTATTCTAAAGGAGCTTTCTTTTCAA
TTAGCAGGAAAGTCTCTTTAAGAGTTATGTTAGggagttcccgttgtggcgcagtggtta
acgaatccgactaggaaccatgaggttgcaggttcgatccctgcccttgctcagtgggtt
aaggacccagcgttgccatgagctgtggtttaggtcgaagacatggctcggatctggcgt
tgctgtggctgtggc

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               294-400, gnl|bosTau2|chr13 (25261680-25261569)
               


               
               299-399, gnl|bosTau2|chr8 (3887221-3887118)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               294-400, gnl|bosTau2|chr13 (25261680-25261569)
               


               
               299-399, gnl|bosTau2|chr8 (3887221-3887118)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	294-400, gnl\|bosTau2\|chr13 (25261680-25261569)

	299-399, gnl\|bosTau2\|chr8 (3887221-3887118)