Non-Coding RNA Search

rret22_k18.y1

Sequence:


               
               GGTAAACCTGGCCCAGTCCACCTTAACTGAATACAGATCAACCCAAGCAGAGCCACACTG
ATTGACCCATGGTGCAGACACCAGCCATGCATGGTTACAGATATGTAGTTAATTCTGTTT
GTCCCCTCCCACATGCTATTAAATGATGGTGATCAAGGACAGATTTATGAGAACACCAAG
GTAACATTTCCCTAACTAGCAAGTGGTAGACAAATATGAAATGGAATATAGAAATTAAAA
AATAGGCAATTATCAAATAAGTTCTAGGGTCAGAAAAAAATTATAAAGAAGTTGAATTTT
ATTCATCTCTTTCTGGGGGAAAAAGGCTTTAAGTGGTGAATAGATTTGACTATGTCCGAT
CATGTAAAATATAAGCCTATGTAGAATTCACTTGGAGATTTTCCTTATTGACCTGATTAC
TTAACCATAGGGTAATAGAAAAGTAATGCGCAGCATCTTTTTGCTTCAGAGAGCATTTGT
TTATAAACTATTTCAGGAATTGCTCAAGAGAAACCTTTAAGAGACTGCCCCTCGAGCAGT
TTCTGTGTTTCCCAAGTTCTAATATTGAATAAATCTTCCTTGCTTCACTTATATTCTAAC
CATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTAAACCTGGCCCAGTCCACCTTAACTGAATACAGATCAACCCAAGCAGAGCCACACTG
ATTGACCCATGGTGCAGACACCAGCCATGCATGGTTACAGATATGTAGTTAATTCTGTTT
GTCCCCTCCCACATGCTATTAAATGATGGTGATCAAGGACAGATTTATGAGAACACCAAG
GTAACATTTCCCTAACTAGCAAGTGGTAGACAAATATGAAATGGAATATAGAAATTAAAA
AATAGGCAATTATCAAATAAGTTCTAGGGTCAGAAAAAAATTATAAAGAAGTTGAATTTT
ATTCATCTCTTTCTGGGGGAAAAAGGCTTTAAGTGGTGAATAGATTTGACTATGTCCGAT
CATGTAAAATATAAGCCTATGTAGAATTCACTTGGAGATTTTCCTTATTGACCTGATTAC
TTAACCATAGGGTAATAGAAAAGTAATGCGCAGCATCTTTTTGCTTCAGAGAGCATTTGT
TTATAAACTATTTCAGGAATTGCTCAAGAGAAACCTTTAAGAGACTGCCCCTCGAGCAGT
TTCTGTGTTTCCCAAGTTCTAATATTGAATAAATCTTCCTTGCTTCACTTATATTCTAAC
CATA

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-133, gnl|bosTau2|chr6 (4559679-4559814)
               

               
               1-133, gnl|Hg17|chr4 (114534692-114534828)
               

               
               1-133, gnl|Mm7|chr3 (126869954-126869831)
               


               
               212-604, gnl|bosTau2|chr6 (4559959-4560341)
               

               
               212-604, gnl|Hg17|chr4 (114534982-114535365)
               

               
               212-604, gnl|Mm7|chr3 (126869647-126869134)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-133, gnl|bosTau2|chr6 (4559679-4559814)
               

               
               1-133, gnl|Hg17|chr4 (114534692-114534828)
               

               
               1-133, gnl|Mm7|chr3 (126869954-126869831)
               


               
               212-604, gnl|bosTau2|chr6 (4559959-4560341)
               

               
               212-604, gnl|Hg17|chr4 (114534982-114535365)
               

               
               212-604, gnl|Mm7|chr3 (126869647-126869134)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	1-133, gnl\|bosTau2\|chr6 (4559679-4559814)
	1-133, gnl\|Hg17\|chr4 (114534692-114534828)
	1-133, gnl\|Mm7\|chr3 (126869954-126869831)

	212-604, gnl\|bosTau2\|chr6 (4559959-4560341)
	212-604, gnl\|Hg17\|chr4 (114534982-114535365)
	212-604, gnl\|Mm7\|chr3 (126869647-126869134)