Non-Coding RNA Search

rret29_d14.y1

Sequence:


               
               CTTATTAAATCTAAGGCAACCTTTAATTGCAGGATATATTATTTTCTTGTGTAGCATGAA
AAAAAGAAAAATCCCTGCCAAACAAATATTGTCCTTTCATCAGCTATATGGTACTATTTG
ATTTTGGTAAGTAAAATATATGTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATTAAATCTAAGGCAACCTTTAATTGCAGGATATATTATTTTCTTGTGTAGCATGAA
AAAAAGAAAAATCCCTGCCAAACAAATATTGTCCTTTCATCAGCTATATGGTACTATTTG
ATTTTGGTAAGTAAAATATATGTATC

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               2-146, gnl|bosTau2|chr3 (64372756-64372901)
               

               
               2-146, gnl|canFam2|chr15 (12826048-12825909)
               

               
               2-146, gnl|dasNov1|scaffold_22494 (53099-52942)
               

               
               2-146, gnl|echTel1|scaffold_301706 (6865-6716)
               

               
               2-146, gnl|hg17|chr1 (51617692-51617834)
               

               
               2-146, gnl|Hg17|chr1 (51617844-51617697)
               

               
               2-146, gnl|loxAfr1|scaffold_5234 (57368-57228)
               

               
               2-146, gnl|oryCun1|scaffold_147352 (14638-14497)
               

               
               2-146, gnl|panTro1|chr1 (49829247-49829389)
               

               
               2-146, gnl|rheMac2|chr1 (54255906-54256048)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-146, gnl|bosTau2|chr3 (64372756-64372901)
               

               
               2-146, gnl|canFam2|chr15 (12826048-12825909)
               

               
               2-146, gnl|dasNov1|scaffold_22494 (53099-52942)
               

               
               2-146, gnl|echTel1|scaffold_301706 (6865-6716)
               

               
               2-146, gnl|hg17|chr1 (51617692-51617834)
               

               
               2-146, gnl|Hg17|chr1 (51617844-51617697)
               

               
               2-146, gnl|loxAfr1|scaffold_5234 (57368-57228)
               

               
               2-146, gnl|oryCun1|scaffold_147352 (14638-14497)
               

               
               2-146, gnl|panTro1|chr1 (49829247-49829389)
               

               
               2-146, gnl|rheMac2|chr1 (54255906-54256048)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	2-146, gnl\|bosTau2\|chr3 (64372756-64372901)
	2-146, gnl\|canFam2\|chr15 (12826048-12825909)
	2-146, gnl\|dasNov1\|scaffold_22494 (53099-52942)
	2-146, gnl\|echTel1\|scaffold_301706 (6865-6716)
	2-146, gnl\|hg17\|chr1 (51617692-51617834)
	2-146, gnl\|Hg17\|chr1 (51617844-51617697)
	2-146, gnl\|loxAfr1\|scaffold_5234 (57368-57228)
	2-146, gnl\|oryCun1\|scaffold_147352 (14638-14497)
	2-146, gnl\|panTro1\|chr1 (49829247-49829389)
	2-146, gnl\|rheMac2\|chr1 (54255906-54256048)