Non-Coding RNA Search

rret34_k9.y1

Sequence:


               
               TTTACAATCCAAGAAAGTCTATGACTAAGATATTGTGTGAAAATCTTTATTCCATTACAA
TTGAACCAATGGTAAAATTAAGATCCTACTTGCTGGTCAAGACTGGTGGACTGATTTCAA
TGGGTAAATCTATTGCGGCAAACTAACATGTCAGACTATTACTCTTTGGGCATTTATGTT
TATATTAATGAGTGTGTTGTCTTTCTTTCTAACAAGTGTTCCCCATTGGGATTTTAAAGC
TAAATGCACAGAATATTTGTCTCCTCTACATATTTTACTTTTCTATTTACAATTCCCTTT
TCCATTGCTAGGTTTTATATACAATTTTTCCCCTAACACATACTTGAACTGAATAACAGA
TTTAAAGGAAGCCTTTGTTCACACTGCCATTCACTTACTTTGTTTGGGGTTGGGAAATGA
GGAATTGGTTTTAAACAAAAACATTCCATCTTTTATTTAACATCAATATAAGAAGAAGAA
GACAAACAACTATCTTTTTCATCTATATTTAAGTACCTTTTTATAATGTAGTATCAAGAT
TTTCTAAGTACTGCAAAATTTAACATTTGTGGAATGAATGGTGAAACTAATCTGATGAAG
TAGAAAGTGTTCTGCAATATTGTAATTTCATAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTACAATCCAAGAAAGTCTATGACTAAGATATTGTGTGAAAATCTTTATTCCATTACAA
TTGAACCAATGGTAAAATTAAGATCCTACTTGCTGGTCAAGACTGGTGGACTGATTTCAA
TGGGTAAATCTATTGCGGCAAACTAACATGTCAGACTATTACTCTTTGGGCATTTATGTT
TATATTAATGAGTGTGTTGTCTTTCTTTCTAACAAGTGTTCCCCATTGGGATTTTAAAGC
TAAATGCACAGAATATTTGTCTCCTCTACATATTTTACTTTTCTATTTACAATTCCCTTT
TCCATTGCTAGGTTTTATATACAATTTTTCCCCTAACACATACTTGAACTGAATAACAGA
TTTAAAGGAAGCCTTTGTTCACACTGCCATTCACTTACTTTGTTTGGGGTTGGGAAATGA
GGAATTGGTTTTAAACAAAAACATTCCATCTTTTATTTAACATCAATATAAGAAGAAGAA
GACAAACAACTATCTTTTTCATCTATATTTAAGTACCTTTTTATAATGTAGTATCAAGAT
TTTCTAAGTACTGCAAAATTTAACATTTGTGGAATGAATGGTGAAACTAATCTGATGAAG
TAGAAAGTGTTCTGCAATATTGTAATTTCATAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-627, gnl|bosTau2|chr1 (56915657-56916306)
               

               
               3-627, gnl|Hg17|chr3 (180044192-180044832)
               

               
               3-627, gnl|Mm7|chr3 (32008303-32008939)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-627, gnl|bosTau2|chr1 (56915657-56916306)
               

               
               3-627, gnl|Hg17|chr3 (180044192-180044832)
               

               
               3-627, gnl|Mm7|chr3 (32008303-32008939)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	3-627, gnl\|bosTau2\|chr1 (56915657-56916306)
	3-627, gnl\|Hg17\|chr3 (180044192-180044832)
	3-627, gnl\|Mm7\|chr3 (32008303-32008939)