Non-Coding RNA Search

rret34_o20.y1

Sequence:


               
               GTAAAATGCAAGATGAGCACAATATGTTATAGCTTCAGATTCCATCTCATTCATAGGTAA
GTTCAAATTGCTGTCAGAGACCATCGGTTCATGACACAAAGGTCAGTAATGTTTCAAAGG
AAAACGCCAAGTTGTATTACCATATTGTCACATTGCTCTGTTGTATAATGGACTAGGGGA
AAGAAGGTGGCCATGCACCAAATCTCAGATGAGGAGGACCTGAGGTTTCAAACCACAGAA
CAGTGTCCTTGCTGCAAGACCAGAGCTGACATACACCCAGCCAGAGCTCTTTGTTGGCTT
TCTCACCATGGTTGGCAGGCATCTGGCAGATATTTTTATCCTGATCCTGGCTGGTCACCA
CTCTGAGGCCAACTATCAGAGAGGAAATTTTACTGGGCTCACAGAAATACAGTGAAAATG
AATCCACACAAAGAACTTCAAATATATACATATATATAATTGGATGGTGAAAAACAATGT
TAGGTGACTTCTGGGCTGAAATTTCCAATTTGATCAATAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAAAATGCAAGATGAGCACAATATGTTATAGCTTCAGATTCCATCTCATTCATAGGTAA
GTTCAAATTGCTGTCAGAGACCATCGGTTCATGACACAAAGGTCAGTAATGTTTCAAAGG
AAAACGCCAAGTTGTATTACCATATTGTCACATTGCTCTGTTGTATAATGGACTAGGGGA
AAGAAGGTGGCCATGCACCAAATCTCAGATGAGGAGGACCTGAGGTTTCAAACCACAGAA
CAGTGTCCTTGCTGCAAGACCAGAGCTGACATACACCCAGCCAGAGCTCTTTGTTGGCTT
TCTCACCATGGTTGGCAGGCATCTGGCAGATATTTTTATCCTGATCCTGGCTGGTCACCA
CTCTGAGGCCAACTATCAGAGAGGAAATTTTACTGGGCTCACAGAAATACAGTGAAAATG
AATCCACACAAAGAACTTCAAATATATACATATATATAATTGGATGGTGAAAAACAATGT
TAGGTGACTTCTGGGCTGAAATTTCCAATTTGATCAATAGG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               2-135, gnl|bosTau2|chr1 (63106661-63106521)
               

               
               2-135, gnl|Hg17|chr3 (171116034-171117287)
               


               
               151-521, gnl|bosTau2|chr1 (63106381-63106026)
               

               
               151-521, gnl|Hg17|chr3 (171117294-171117665)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-135, gnl|bosTau2|chr1 (63106661-63106521)
               

               
               2-135, gnl|Hg17|chr3 (171116034-171117287)
               


               
               151-521, gnl|bosTau2|chr1 (63106381-63106026)
               

               
               151-521, gnl|Hg17|chr3 (171117294-171117665)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	2-135, gnl\|bosTau2\|chr1 (63106661-63106521)
	2-135, gnl\|Hg17\|chr3 (171116034-171117287)

	151-521, gnl\|bosTau2\|chr1 (63106381-63106026)
	151-521, gnl\|Hg17\|chr3 (171117294-171117665)