Non-Coding RNA Search

rret36_b20.y1

Sequence:


               
               ATTGAATGGAGGCCTGAGTATAAGTTATAGACACATTATGCAGAGTGTCGGCACCACAAC
CTCCATGTTCAAGGGTCAGCTGTAAACACATATAAATATACATATATCTGTACACACATA
CCACTTTGTATAATTATCTTTAGAAAATGTATAGGTTCCTATTTAAGTAAATGTTATAAA
TATTAGTAATAAGACGCAAATATTTCTGTGCCGTCAAAATAAGGTAATTTCTATTAGAGT
GATTATGAAGAACTATAGTAGGATCTAATCTTCTTTCATTCTAATGTCATTTTTGCTGTT
AATTCACAAAATCTATATTGCCACATATGGATGGGATGATAGTATTATGATTGTCAGACT
CATCTCTGAATCTGTGAATGGAATGAATCATCAAAATTTAGCCATTAAACTTTTCTCTTT
TTCCTAGGCTTTGAAATGATCTGAAAGAAAATATTTTAGCTCTTCAGAAGATAGTTATTT
TATATATATCCTAAATATTATTTCTAAGTGCCAATAGAAAATCAATTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGAATGGAGGCCTGAGTATAAGTTATAGACACATTATGCAGAGTGTCGGCACCACAAC
CTCCATGTTCAAGGGTCAGCTGTAAACACATATAAATATACATATATCTGTACACACATA
CCACTTTGTATAATTATCTTTAGAAAATGTATAGGTTCCTATTTAAGTAAATGTTATAAA
TATTAGTAATAAGACGCAAATATTTCTGTGCCGTCAAAATAAGGTAATTTCTATTAGAGT
GATTATGAAGAACTATAGTAGGATCTAATCTTCTTTCATTCTAATGTCATTTTTGCTGTT
AATTCACAAAATCTATATTGCCACATATGGATGGGATGATAGTATTATGATTGTCAGACT
CATCTCTGAATCTGTGAATGGAATGAATCATCAAAATTTAGCCATTAAACTTTTCTCTTT
TTCCTAGGCTTTGAAATGATCTGAAAGAAAATATTTTAGCTCTTCAGAAGATAGTTATTT
TATATATATCCTAAATATTATTTCTAAGTGCCAATAGAAAATCAATTTCC

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               6-202, gnl|bosTau2|chr21 (30277325-30277135)
               


               
               240-530, gnl|bosTau2|chr21 (30277124-30276835)
               

               
               240-530, gnl|Hg17|chr14 (35084371-35084052)
               

               
               240-530, gnl|Mm7|chr12 (53535135-53534818)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-202, gnl|bosTau2|chr21 (30277325-30277135)
               


               
               240-530, gnl|bosTau2|chr21 (30277124-30276835)
               

               
               240-530, gnl|Hg17|chr14 (35084371-35084052)
               

               
               240-530, gnl|Mm7|chr12 (53535135-53534818)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	6-202, gnl\|bosTau2\|chr21 (30277325-30277135)

	240-530, gnl\|bosTau2\|chr21 (30277124-30276835)
	240-530, gnl\|Hg17\|chr14 (35084371-35084052)
	240-530, gnl\|Mm7\|chr12 (53535135-53534818)