Non-Coding RNA Search

rret38_i1.y1

Sequence:


               
               CTCTATTGTTAGATAATAAATCGAGTCCGTTACAGGATTGACATAATACAACCAAATCAA
GTGGACACAGAGAGAGAAGGACGTGGCCCAGGATAACAGTTATCACTAATAACATCTGCT
ATATGTAAATTTATATATAATTTTAAATAAATACTAGGAGATGAAAAGCCATGATGTAAA
TGAATATCATAGACATCACAGACTTTTTATGATTAAAAATCACTTGTCAGGTTGTTCAGG
CAATTGATTTTTAATCTGTGTTTTCTTACTACAGCTTGAAATGATTTAGTTTGTCCTCCA
TAGATTCATCTTTCTTTAGGTTCAGTATAATGTATATTATGAATTTCAGCAGACTGTTTC
GTTAAGGAATGAAAGCAGCTTCTTGCTTCCTTTCCATAAAAAGACATGGCTTCGTGTGAG
TTCTTGTAACCTAATCAATTGTTGATAATCATCCCAGATTTCAATAGCATAATCTTATGT
ATAAATTTATTTTTCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTATTGTTAGATAATAAATCGAGTCCGTTACAGGATTGACATAATACAACCAAATCAA
GTGGACACAGAGAGAGAAGGACGTGGCCCAGGATAACAGTTATCACTAATAACATCTGCT
ATATGTAAATTTATATATAATTTTAAATAAATACTAGGAGATGAAAAGCCATGATGTAAA
TGAATATCATAGACATCACAGACTTTTTATGATTAAAAATCACTTGTCAGGTTGTTCAGG
CAATTGATTTTTAATCTGTGTTTTCTTACTACAGCTTGAAATGATTTAGTTTGTCCTCCA
TAGATTCATCTTTCTTTAGGTTCAGTATAATGTATATTATGAATTTCAGCAGACTGTTTC
GTTAAGGAATGAAAGCAGCTTCTTGCTTCCTTTCCATAAAAAGACATGGCTTCGTGTGAG
TTCTTGTAACCTAATCAATTGTTGATAATCATCCCAGATTTCAATAGCATAATCTTATGT
ATAAATTTATTTTTCCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               149-260, + strand, RNAz p=0.999019

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               149-260, + strand, RNAz p=0.999019

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-497, gnl|bosTau2|chr17 (8899087-8899578)
               

               
               1-497, gnl|Hg17|chr4 (144751486-144751985)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-497, gnl|bosTau2|chr17 (8899087-8899578)
               

               
               1-497, gnl|Hg17|chr4 (144751486-144751985)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ret (0.128733)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	1-497, gnl\|bosTau2\|chr17 (8899087-8899578)
	1-497, gnl\|Hg17\|chr4 (144751486-144751985)