Non-Coding RNA Search

rret38_k1.y1

Sequence:


               
               GCTCTAAGTAGATTCTCCTCATAGCATAGAGTTTTAGTTTATTTATTTTGCACGTATGTT
TGAAACCAACTGCTGTAGGAAATGAACAATCCACTTGAAAACTATGCTTTACTTTTATCT
GCCAGCAGACATTTTGGAAATGTTCACTTTAATCAGATGATCTTTTTAGGTTAGTTTTTG
TGCAAACATTAAAGTAGCAATTACTTGATTTTAAATAGTCAAAATTTTCAGATTATTGGT
TAAAATTATTTGAAAACAAATTTTGGGTAATAAAAGTCAGAACTCAGTACATATAATCTA
GTTACCACACAGTTTCATACATAGCAGAAACATACACCTGATATTTCCAAACTCTTATTA
GTCTTTCTGCTGTACTCCAGCTGACCAGAACAGCTCCAGGAATGGGTGCTACTCAATAAT
AGCGATAACTTGGCGTGGACTATTTAGGGTGTTAATAATGAAGCCATATGTTTATGTCTG
GATTTACAATTTTTAAACAATCACTTACTATGTCATTTCGCTTTACCTTGGAGAACAAAA
ATGGTTGTTTCACTTCACAAATCAGCAAGATCTAATTTATGGCAAGAACTATTCTGTTGA
AATGTGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCTAAGTAGATTCTCCTCATAGCATAGAGTTTTAGTTTATTTATTTTGCACGTATGTT
TGAAACCAACTGCTGTAGGAAATGAACAATCCACTTGAAAACTATGCTTTACTTTTATCT
GCCAGCAGACATTTTGGAAATGTTCACTTTAATCAGATGATCTTTTTAGGTTAGTTTTTG
TGCAAACATTAAAGTAGCAATTACTTGATTTTAAATAGTCAAAATTTTCAGATTATTGGT
TAAAATTATTTGAAAACAAATTTTGGGTAATAAAAGTCAGAACTCAGTACATATAATCTA
GTTACCACACAGTTTCATACATAGCAGAAACATACACCTGATATTTCCAAACTCTTATTA
GTCTTTCTGCTGTACTCCAGCTGACCAGAACAGCTCCAGGAATGGGTGCTACTCAATAAT
AGCGATAACTTGGCGTGGACTATTTAGGGTGTTAATAATGAAGCCATATGTTTATGTCTG
GATTTACAATTTTTAAACAATCACTTACTATGTCATTTCGCTTTACCTTGGAGAACAAAA
ATGGTTGTTTCACTTCACAAATCAGCAAGATCTAATTTATGGCAAGAACTATTCTGTTGA
AATGTGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-604, gnl|bosTau2|chr14 (12391945-12392560)
               

               
               1-604, gnl|Hg17|chr8 (55122159-55121563)
               

               
               1-604, gnl|Mm7|chr1 (4841700-4842251)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-604, gnl|bosTau2|chr14 (12391945-12392560)
               

               
               1-604, gnl|Hg17|chr8 (55122159-55121563)
               

               
               1-604, gnl|Mm7|chr1 (4841700-4842251)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	1-604, gnl\|bosTau2\|chr14 (12391945-12392560)
	1-604, gnl\|Hg17\|chr8 (55122159-55121563)
	1-604, gnl\|Mm7\|chr1 (4841700-4842251)