Non-Coding RNA Search

rsag16_e13.y1

Sequence:


               
               TGACTAGCCATTTAGCCTCAGAATGGTCAATAGTATTTCATAGTATATAACCAAAGAAAG
TGGTGATCATATAATCAGCTTACTCCTAAATGAGAACTTGTGGCAAATCCTCTCACCATG
GTCAAAATCCCAAGAAACTGTTAATCTAAAATTTTTCTGAACATTAGCTTGGCTCGTTAA
GTTCTTATACTACCTGCTTTTCATGTAACAGTTTATCACACATGAGTGCAAAGCAAATGG
ATGGTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACTAGCCATTTAGCCTCAGAATGGTCAATAGTATTTCATAGTATATAACCAAAGAAAG
TGGTGATCATATAATCAGCTTACTCCTAAATGAGAACTTGTGGCAAATCCTCTCACCATG
GTCAAAATCCCAAGAAACTGTTAATCTAAAATTTTTCTGAACATTAGCTTGGCTCGTTAA
GTTCTTATACTACCTGCTTTTCATGTAACAGTTTATCACACATGAGTGCAAAGCAAATGG
ATGGTTAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-245, gnl|bosTau2|chr10 (56406481-56406724)
               

               
               1-245, gnl|canFam2|chr8 (50979381-50980121)
               

               
               1-245, gnl|dasNov1|scaffold_8910 (39707-38938)
               

               
               1-245, gnl|echTel1|scaffold_323847 (50793-51558)
               

               
               1-245, gnl|hg17|chr14 (74364708-74365462)
               

               
               1-245, gnl|Hg17|chr14 (74365045-74365285)
               

               
               1-245, gnl|loxAfr1|scaffold_1664 (15632-16426)
               

               
               1-245, gnl|mm7|chr12 (83063908-83064605)
               

               
               1-245, gnl|Mm7|chr12 (83064208-83064429)
               

               
               1-245, gnl|monDom2|scaffold_8 (59741418-59740635)
               

               
               1-245, gnl|oryCun1|scaffold_214854 (18637-17898)
               

               
               1-245, gnl|panTro1|chr15 (74367474-74368228)
               

               
               1-245, gnl|rheMac2|chr7 (137939452-137940205)
               

               
               1-245, gnl|rn3|chr6 (109114881-109115636)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-245, gnl|bosTau2|chr10 (56406481-56406724)
               

               
               1-245, gnl|canFam2|chr8 (50979381-50980121)
               

               
               1-245, gnl|dasNov1|scaffold_8910 (39707-38938)
               

               
               1-245, gnl|echTel1|scaffold_323847 (50793-51558)
               

               
               1-245, gnl|hg17|chr14 (74364708-74365462)
               

               
               1-245, gnl|Hg17|chr14 (74365045-74365285)
               

               
               1-245, gnl|loxAfr1|scaffold_1664 (15632-16426)
               

               
               1-245, gnl|mm7|chr12 (83063908-83064605)
               

               
               1-245, gnl|Mm7|chr12 (83064208-83064429)
               

               
               1-245, gnl|monDom2|scaffold_8 (59741418-59740635)
               

               
               1-245, gnl|oryCun1|scaffold_214854 (18637-17898)
               

               
               1-245, gnl|panTro1|chr15 (74367474-74368228)
               

               
               1-245, gnl|rheMac2|chr7 (137939452-137940205)
               

               
               1-245, gnl|rn3|chr6 (109114881-109115636)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sag (0.182715)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)

	1-245, gnl\|bosTau2\|chr10 (56406481-56406724)
	1-245, gnl\|canFam2\|chr8 (50979381-50980121)
	1-245, gnl\|dasNov1\|scaffold_8910 (39707-38938)
	1-245, gnl\|echTel1\|scaffold_323847 (50793-51558)
	1-245, gnl\|hg17\|chr14 (74364708-74365462)
	1-245, gnl\|Hg17\|chr14 (74365045-74365285)
	1-245, gnl\|loxAfr1\|scaffold_1664 (15632-16426)
	1-245, gnl\|mm7\|chr12 (83063908-83064605)
	1-245, gnl\|Mm7\|chr12 (83064208-83064429)
	1-245, gnl\|monDom2\|scaffold_8 (59741418-59740635)
	1-245, gnl\|oryCun1\|scaffold_214854 (18637-17898)
	1-245, gnl\|panTro1\|chr15 (74367474-74368228)
	1-245, gnl\|rheMac2\|chr7 (137939452-137940205)
	1-245, gnl\|rn3\|chr6 (109114881-109115636)