Non-Coding RNA Search

rsin05_m10.y1

Sequence:


               
               GTGCCAAGAGCAGGTTAAAACAGATGGAAGTTAAACTCAGGTAATTACAATTTCTGTTTG
TTTTTCAAAGTACTCAACACATCAGCAATGGTAACATCAATAAAGCTGAAGTTCCTAAGT
TAAAAGTTCAGTTTCGAAAGCCTTTTATCAACAGTTTAGTCAGATCATAGGGATTTGTTA
GCTAGTCCTGCAGGTCAGCACCTCTTTCTTTTTTCCAGTTCACTTGCATCAACCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCAAGAGCAGGTTAAAACAGATGGAAGTTAAACTCAGGTAATTACAATTTCTGTTTG
TTTTTCAAAGTACTCAACACATCAGCAATGGTAACATCAATAAAGCTGAAGTTCCTAAGT
TAAAAGTTCAGTTTCGAAAGCCTTTTATCAACAGTTTAGTCAGATCATAGGGATTTGTTA
GCTAGTCCTGCAGGTCAGCACCTCTTTCTTTTTTCCAGTTCACTTGCATCAACCCT

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               7-236, gnl|bosTau2|chr1 (29460395-29460167)
               

               
               7-236, gnl|canFam2|chr33 (17366257-17366565)
               

               
               7-236, gnl|hg17|chr3 (110342196-110342497)
               

               
               7-236, gnl|Hg17|chr3 (110342347-110342914)
               

               
               7-236, gnl|mm7|chr16 (48169595-48169253)
               

               
               7-236, gnl|Mm7|chr16 (48169443-48169176)
               

               
               7-236, gnl|oryCun1|scaffold_202033 (94809-95090)
               

               
               7-236, gnl|panTro1|chr2 (111861931-111862232)
               

               
               7-236, gnl|rheMac2|chr2 (29256105-29256406)
               

               
               7-236, gnl|rn3|chr11 (53738787-53739129)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-236, gnl|bosTau2|chr1 (29460395-29460167)
               

               
               7-236, gnl|canFam2|chr33 (17366257-17366565)
               

               
               7-236, gnl|hg17|chr3 (110342196-110342497)
               

               
               7-236, gnl|Hg17|chr3 (110342347-110342914)
               

               
               7-236, gnl|mm7|chr16 (48169595-48169253)
               

               
               7-236, gnl|Mm7|chr16 (48169443-48169176)
               

               
               7-236, gnl|oryCun1|scaffold_202033 (94809-95090)
               

               
               7-236, gnl|panTro1|chr2 (111861931-111862232)
               

               
               7-236, gnl|rheMac2|chr2 (29256105-29256406)
               

               
               7-236, gnl|rn3|chr11 (53738787-53739129)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sin (0.174948)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	7-236, gnl\|bosTau2\|chr1 (29460395-29460167)
	7-236, gnl\|canFam2\|chr33 (17366257-17366565)
	7-236, gnl\|hg17\|chr3 (110342196-110342497)
	7-236, gnl\|Hg17\|chr3 (110342347-110342914)
	7-236, gnl\|mm7\|chr16 (48169595-48169253)
	7-236, gnl\|Mm7\|chr16 (48169443-48169176)
	7-236, gnl\|oryCun1\|scaffold_202033 (94809-95090)
	7-236, gnl\|panTro1\|chr2 (111861931-111862232)
	7-236, gnl\|rheMac2\|chr2 (29256105-29256406)
	7-236, gnl\|rn3\|chr11 (53738787-53739129)