Non-Coding RNA Search

rsin19_k15.y1

Sequence:


               
               GAGGCTAGATTATCCATGCTGTTTCCCCCAATTAGTGATTAAGTGATTTTTGAAGTTGAA
CTGAAATAGCATCTCAATTTTGCGTATAGCCTATATTCTAGAGTTAGCAAGGAATGAGAA
TTTGATTTGATGAATTGGAACCTTCTTGATGAACTTCTTGTAGACTGCTAAGTAGTAAAT
AAGGGAAAAAGAGTCTGTTGGTGTGATTTTTAGTATTAATTTTTCTTATAGACTCTTGCA
GACCAAAAATGAAAAGTTTCCCCCTTTCTCTCCCCAAATTTCTGGTGTTTTGTATGTCTC
ATTTTCTATTTGCCAGACCACCTTTCTGGATTAAATTTGAAGGTGGCTTTTATTTTTGCG
TATGTGTGTGAGAGAAAACTATCAAAGCCAAACAATGTATTTCTCTTTTGTGTACTGCAA
GTATAATACTTAGATATAATTGCAGATTTTGTTTGTTCAAGTTAGTATCCATATAATATC
TGACATTGAAAAACTGCTTTCATGGAGTGATAGAATTTTTAGAGCTTGCAGCAGGAAACT
TTGCTCTTTTAATATTCTTGTTTGAGAAGTGATGAAACTAAATCTCGAATAATTTGTAAT
TTCCGGAATGTCACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCTAGATTATCCATGCTGTTTCCCCCAATTAGTGATTAAGTGATTTTTGAAGTTGAA
CTGAAATAGCATCTCAATTTTGCGTATAGCCTATATTCTAGAGTTAGCAAGGAATGAGAA
TTTGATTTGATGAATTGGAACCTTCTTGATGAACTTCTTGTAGACTGCTAAGTAGTAAAT
AAGGGAAAAAGAGTCTGTTGGTGTGATTTTTAGTATTAATTTTTCTTATAGACTCTTGCA
GACCAAAAATGAAAAGTTTCCCCCTTTCTCTCCCCAAATTTCTGGTGTTTTGTATGTCTC
ATTTTCTATTTGCCAGACCACCTTTCTGGATTAAATTTGAAGGTGGCTTTTATTTTTGCG
TATGTGTGTGAGAGAAAACTATCAAAGCCAAACAATGTATTTCTCTTTTGTGTACTGCAA
GTATAATACTTAGATATAATTGCAGATTTTGTTTGTTCAAGTTAGTATCCATATAATATC
TGACATTGAAAAACTGCTTTCATGGAGTGATAGAATTTTTAGAGCTTGCAGCAGGAAACT
TTGCTCTTTTAATATTCTTGTTTGAGAAGTGATGAAACTAAATCTCGAATAATTTGTAAT
TTCCGGAATGTCACAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-616, gnl|bosTau2|chr13 (45100298-45099693)
               

               
               6-616, gnl|Hg17|chr20 (33708784-33708183)
               

               
               6-616, gnl|Mm7|chr2 (155843094-155841929)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-616, gnl|bosTau2|chr13 (45100298-45099693)
               

               
               6-616, gnl|Hg17|chr20 (33708784-33708183)
               

               
               6-616, gnl|Mm7|chr2 (155843094-155841929)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sin (0.174948)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	6-616, gnl\|bosTau2\|chr13 (45100298-45099693)
	6-616, gnl\|Hg17\|chr20 (33708784-33708183)
	6-616, gnl\|Mm7\|chr2 (155843094-155841929)