Non-Coding RNA Search

rsin28_f6.y1

Sequence:


               
               GGCAGTTGGACATTTTGGATTATATAAAATTTTCTTAAGCCAATGAGACTAATGTTATAT
CATTAATAACCACTCAGAATAACTTTCTTCTTTCATAAAGTACAAAACACCTTTACATTT
TATTTTTCTGAAGTGAACTCTTAAAGCCAGAAAGGACTTAGGAAATAACCATCTGTGCCA
TGCCTCTCCCTGCCTTATTAGAGAGGGTAAGGCTTTTACTGATCACAAAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAGTTGGACATTTTGGATTATATAAAATTTTCTTAAGCCAATGAGACTAATGTTATAT
CATTAATAACCACTCAGAATAACTTTCTTCTTTCATAAAGTACAAAACACCTTTACATTT
TATTTTTCTGAAGTGAACTCTTAAAGCCAGAAAGGACTTAGGAAATAACCATCTGTGCCA
TGCCTCTCCCTGCCTTATTAGAGAGGGTAAGGCTTTTACTGATCACAAAGCA

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               1-232, gnl|bosTau2|chr28 (22151167-22150931)
               

               
               1-232, gnl|canFam2|chr4 (26402752-26403010)
               

               
               1-232, gnl|dasNov1|scaffold_23449 (9788-10071)
               

               
               1-232, gnl|hg17|chr10 (74011385-74011688)
               

               
               1-232, gnl|Hg17|chr10 (74012072-74011497)
               

               
               1-232, gnl|panTro1|chr8 (75214012-75214315)
               

               
               1-232, gnl|rheMac2|chr9 (64407818-64407513)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-232, gnl|bosTau2|chr28 (22151167-22150931)
               

               
               1-232, gnl|canFam2|chr4 (26402752-26403010)
               

               
               1-232, gnl|dasNov1|scaffold_23449 (9788-10071)
               

               
               1-232, gnl|hg17|chr10 (74011385-74011688)
               

               
               1-232, gnl|Hg17|chr10 (74012072-74011497)
               

               
               1-232, gnl|panTro1|chr8 (75214012-75214315)
               

               
               1-232, gnl|rheMac2|chr9 (64407818-64407513)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               sin (0.174948)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	1-232, gnl\|bosTau2\|chr28 (22151167-22150931)
	1-232, gnl\|canFam2\|chr4 (26402752-26403010)
	1-232, gnl\|dasNov1\|scaffold_23449 (9788-10071)
	1-232, gnl\|hg17\|chr10 (74011385-74011688)
	1-232, gnl\|Hg17\|chr10 (74012072-74011497)
	1-232, gnl\|panTro1\|chr8 (75214012-75214315)
	1-232, gnl\|rheMac2\|chr9 (64407818-64407513)