Non-Coding RNA Search

rsin31_h11.y1

Sequence:


               
               AAAGTGGTAAGTTTCATAAATCTTAAAATCTTAATGTAATTACTGTCATCTCTTTGGGTC
AGTATGTAAGTTCAAAAGCAAAACCAGGTCATCAAATTAAAATTTATCACTTTCAGAGCT
AGACAGACGCTCCTAAATATCTAATGAACTACCAGTCAGCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGTGGTAAGTTTCATAAATCTTAAAATCTTAATGTAATTACTGTCATCTCTTTGGGTC
AGTATGTAAGTTCAAAAGCAAAACCAGGTCATCAAATTAAAATTTATCACTTTCAGAGCT
AGACAGACGCTCCTAAATATCTAATGAACTACCAGTCAGCCTT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-163, gnl|bosTau2|chr6 (53325753-53325598)
               

               
               1-163, gnl|dasNov1|scaffold_30592 (39259-38357)
               

               
               1-163, gnl|hg17|chr4 (82390228-82391130)
               

               
               1-163, gnl|Hg17|chr4 (82391009-82390843)
               

               
               1-163, gnl|loxAfr1|scaffold_28199 (12845-13838)
               

               
               1-163, gnl|mm7|chr5 (98163562-98164473)
               

               
               1-163, gnl|Mm7|chr5 (98164350-98164184)
               

               
               1-163, gnl|oryCun1|scaffold_198238 (62013-61164)
               

               
               1-163, gnl|panTro1|chr3 (64656042-64655139)
               

               
               1-163, gnl|rheMac2|chr5 (48456110-48455210)
               

               
               1-163, gnl|rn3|chr14 (11987563-11986674)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-163, gnl|bosTau2|chr6 (53325753-53325598)
               

               
               1-163, gnl|dasNov1|scaffold_30592 (39259-38357)
               

               
               1-163, gnl|hg17|chr4 (82390228-82391130)
               

               
               1-163, gnl|Hg17|chr4 (82391009-82390843)
               

               
               1-163, gnl|loxAfr1|scaffold_28199 (12845-13838)
               

               
               1-163, gnl|mm7|chr5 (98163562-98164473)
               

               
               1-163, gnl|Mm7|chr5 (98164350-98164184)
               

               
               1-163, gnl|oryCun1|scaffold_198238 (62013-61164)
               

               
               1-163, gnl|panTro1|chr3 (64656042-64655139)
               

               
               1-163, gnl|rheMac2|chr5 (48456110-48455210)
               

               
               1-163, gnl|rn3|chr14 (11987563-11986674)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sin (0.174948)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	1-163, gnl\|bosTau2\|chr6 (53325753-53325598)
	1-163, gnl\|dasNov1\|scaffold_30592 (39259-38357)
	1-163, gnl\|hg17\|chr4 (82390228-82391130)
	1-163, gnl\|Hg17\|chr4 (82391009-82390843)
	1-163, gnl\|loxAfr1\|scaffold_28199 (12845-13838)
	1-163, gnl\|mm7\|chr5 (98163562-98164473)
	1-163, gnl\|Mm7\|chr5 (98164350-98164184)
	1-163, gnl\|oryCun1\|scaffold_198238 (62013-61164)
	1-163, gnl\|panTro1\|chr3 (64656042-64655139)
	1-163, gnl\|rheMac2\|chr5 (48456110-48455210)
	1-163, gnl\|rn3\|chr14 (11987563-11986674)