Non-Coding RNA Search

rsin35_b24.y1

Sequence:


               
               TTCTCTAAGATTCTATTTTAAGAAGCAGATGATTTCTAGTTTGTACTTTCCCTTGAGCAG
CCCAAGCAGAGCTACCTCTAAAGGCCTCTGCAGGTCTGCAGTACCAGATGCCCTTGGTCC
AGGCCAGCCCTTTGCCCTTCATCCCTGAGCAGACTGGCAGCCCTGCAGAGAGGTTCCCAA
GCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTCTAAGATTCTATTTTAAGAAGCAGATGATTTCTAGTTTGTACTTTCCCTTGAGCAG
CCCAAGCAGAGCTACCTCTAAAGGCCTCTGCAGGTCTGCAGTACCAGATGCCCTTGGTCC
AGGCCAGCCCTTTGCCCTTCATCCCTGAGCAGACTGGCAGCCCTGCAGAGAGGTTCCCAA
GCTCT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               2-185, gnl|bosTau2|chr1 (81124039-81123856)
               

               
               2-185, gnl|canFam2|chr23 (38673041-38673286)
               

               
               2-185, gnl|dasNov1|scaffold_24795 (9820-10104)
               

               
               2-185, gnl|hg17|chr3 (140653853-140654145)
               

               
               2-185, gnl|Hg17|chr3 (140654159-140653937)
               

               
               2-185, gnl|loxAfr1|scaffold_51961 (6481-6178)
               

               
               2-185, gnl|mm7|chr9 (98151849-98151559)
               

               
               2-185, gnl|Mm7|chr9 (98151538-98151767)
               

               
               2-185, gnl|oryCun1|scaffold_131448 (1050-1345)
               

               
               2-185, gnl|panTro1|chr2 (143177035-143177327)
               

               
               2-185, gnl|rheMac2|chr2 (148372910-148372621)
               

               
               2-185, gnl|rn3|chr8 (103705744-103705448)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-185, gnl|bosTau2|chr1 (81124039-81123856)
               

               
               2-185, gnl|canFam2|chr23 (38673041-38673286)
               

               
               2-185, gnl|dasNov1|scaffold_24795 (9820-10104)
               

               
               2-185, gnl|hg17|chr3 (140653853-140654145)
               

               
               2-185, gnl|Hg17|chr3 (140654159-140653937)
               

               
               2-185, gnl|loxAfr1|scaffold_51961 (6481-6178)
               

               
               2-185, gnl|mm7|chr9 (98151849-98151559)
               

               
               2-185, gnl|Mm7|chr9 (98151538-98151767)
               

               
               2-185, gnl|oryCun1|scaffold_131448 (1050-1345)
               

               
               2-185, gnl|panTro1|chr2 (143177035-143177327)
               

               
               2-185, gnl|rheMac2|chr2 (148372910-148372621)
               

               
               2-185, gnl|rn3|chr8 (103705744-103705448)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sin (0.174948)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	2-185, gnl\|bosTau2\|chr1 (81124039-81123856)
	2-185, gnl\|canFam2\|chr23 (38673041-38673286)
	2-185, gnl\|dasNov1\|scaffold_24795 (9820-10104)
	2-185, gnl\|hg17\|chr3 (140653853-140654145)
	2-185, gnl\|Hg17\|chr3 (140654159-140653937)
	2-185, gnl\|loxAfr1\|scaffold_51961 (6481-6178)
	2-185, gnl\|mm7\|chr9 (98151849-98151559)
	2-185, gnl\|Mm7\|chr9 (98151538-98151767)
	2-185, gnl\|oryCun1\|scaffold_131448 (1050-1345)
	2-185, gnl\|panTro1\|chr2 (143177035-143177327)
	2-185, gnl\|rheMac2\|chr2 (148372910-148372621)
	2-185, gnl\|rn3\|chr8 (103705744-103705448)