rski0132_o23.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCAGTTGGCATTCCTTCGACTTCTCTCTAGCCGAGCTTCCCAGAACATCACATATCACT GCAAGAATAGCATTGCGTACATGGAACATGCCAGTGGGAATGTAAAGAAAGCCTTGAGGC TGATGGGATCAAATGAAGGTGAATTCAAGGCTGAAGGAAATAGCAAATTCACATACACCG TTCTGGAGGATGGTTGCACTAAACACACTGGGGAATGGGGCAAGACAGTCTTCGAATATC GAACACGCAAGGCTGTGAGACTACCTATTGTAGATATTGCACCCTATGATATTGGTGGTC CTGATCAAGAATTTGGTGCGGACATTGGCCCTGTTTGCTTTTTATAAACCAAACTCTATC TGAATTCCCAGCAAAAGATTTCACACTCCATATGTGTTCCTTTTGTTCTCATCTTGTCAA CCAGTACAAGTGACCAACTAAATTCCAGTTATTTATTTCCAAAATTTTTGGAAAAAGGAT AATTTGACCTAAAAAGGATACTTTTTTCTGTCACACCAAATACAGTTCGAATGCTTTTTG TTCTATTTATTTACCAGTTCCAATTTCAAATGTCTCAATGGTGCTATAATAAATAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCAGTTGGCATTCCTTCGACTTCTCTCTAGCCGAGCTTCCCAGAACATCACATATCACT GCAAGAATAGCATTGCGTACATGGAACATGCCAGTGGGAATGTAAAGAAAGCCTTGAGGC TGATGGGATCAAATGAAGGTGAATTCAAGGCTGAAGGAAATAGCAAATTCACATACACCG TTCTGGAGGATGGTTGCACTAAACACACTGGGGAATGGGGCAAGACAGTCTTCGAATATC GAACACGCAAGGCTGTGAGACTACCTATTGTAGATATTGCACCCTATGATATTGGTGGTC CTGATCAAGAATTTGGTGCGGACATTGGCCCTGTTTGCTTTTTATAAACCAAACTCTATC TGAATTCCCAGCAAAAGATTTCACACTCCATATGTGTTCCTTTTGTTCTCATCTTGTCAA CCAGTACAAGTGACCAACTAAATTCCAGTTATTTATTTCCAAAATTTTTGGAAAAAGGAT AATTTGACCTAAAAAGGATACTTTTTTCTGTCACACCAAATACAGTTCGAATGCTTTTTG TTCTATTTATTTACCAGTTCCAATTTCAAATGTCTCAATGGTGCTATAATAAATAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-119, - strand, RNAz p=0.708344 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, - strand, RNAz p=0.708344 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-199, gnl|bosTau2|chr19 (29188505-29188703) | |
| 1-199, gnl|Hg17|chr17 (45618337-45618139) | |
| 1-199, gnl|Mm7|chr11 (95060183-95060381) | |
| 201-596, gnl|bosTau2|chr2 (3118979-3118585) | |
| 201-596, gnl|Hg17|chr2 (189701860-189702265) | |
| 201-596, gnl|Mm7|chr1 (45585252-45585650) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-199, gnl|bosTau2|chr19 (29188505-29188703) | |
| 1-199, gnl|Hg17|chr17 (45618337-45618139) | |
| 1-199, gnl|Mm7|chr11 (95060183-95060381) | |
| 201-596, gnl|bosTau2|chr2 (3118979-3118585) | |
| 201-596, gnl|Hg17|chr2 (189701860-189702265) | |
| 201-596, gnl|Mm7|chr1 (45585252-45585650) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.146735) |