rsme005_j20r1.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATACATGAGCAGCTATTTCAAGTACAAAGAAGTTTATGAACACTTCAAGGCAAATGGGT ATACACTTGGACCCAAAGACGTACCATTTGTCCATGTCCGGAGGGTCAACAATGTTACCA GTGAGAGACTGTATCGACAGTTGTACCACAAACTGAAAGACAAGATCCACACAACTCCAG ACACACCTGAAATCCGCCAAGTCAAGAAGACACAAGAGGCTGTCAGTGAGTTGATTTACA AGTCAGACTTCTTCAAGATGCAAGGACACATGATCTCGATGCCGTACACACCCCACGTGC TCCATTGCCGCTACGTGGGAGACATCACCAGTGATATTAAATACAAAGAGGACTTGCAGA TCCTGAGGGGACTGGGCTGCTTCCTATACGACACTCCTGACATGGTCCGCTCCCGACACC TGCGGAAGCTCTGGTCTAATTACCTGTACACTGATAATGCAAGGAAGATGCGAGACAAAT ACAAAGTGGTGCTTGACACTCCAGAATACAGAAAAGTGCAGGAGCTGAAGACACATCTGA GTGAGCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATACATGAGCAGCTATTTCAAGTACAAAGAAGTTTATGAACACTTCAAGGCAAATGGGT ATACACTTGGACCCAAAGACGTACCATTTGTCCATGTCCGGAGGGTCAACAATGTTACCA GTGAGAGACTGTATCGACAGTTGTACCACAAACTGAAAGACAAGATCCACACAACTCCAG ACACACCTGAAATCCGCCAAGTCAAGAAGACACAAGAGGCTGTCAGTGAGTTGATTTACA AGTCAGACTTCTTCAAGATGCAAGGACACATGATCTCGATGCCGTACACACCCCACGTGC TCCATTGCCGCTACGTGGGAGACATCACCAGTGATATTAAATACAAAGAGGACTTGCAGA TCCTGAGGGGACTGGGCTGCTTCCTATACGACACTCCTGACATGGTCCGCTCCCGACACC TGCGGAAGCTCTGGTCTAATTACCTGTACACTGATAATGCAAGGAAGATGCGAGACAAAT ACAAAGTGGTGCTTGACACTCCAGAATACAGAAAAGTGCAGGAGCTGAAGACACATCTGA GTGAGCTGG |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 118-233, gnl|bosTau2|chr2 (9277643-9277527) | |
| 118-233, gnl|canFam2|chr19 (55805839-55805997) | |
| 118-233, gnl|danRer3|chr9 (14978708-14978574) | |
| 118-233, gnl|dasNov1|scaffold_185 (63498-63656) | |
| 118-233, gnl|echTel1|scaffold_318019 (107561-107404) | |
| 118-233, gnl|fr1|chrUn (158644313-158644433) | |
| 118-233, gnl|galGal2|chr7 (35876839-35876997) | |
| 118-233, gnl|hg17|chr2 (152229639-152229797) | |
| 118-233, gnl|Hg17|chr2 (152229769-152229653) | |
| 118-233, gnl|loxAfr1|scaffold_239 (7053-7211) | |
| 118-233, gnl|mm7|chr2 (52202918-52203072) | |
| 118-233, gnl|Mm7|chr2 (52203044-52202928) | |
| 118-233, gnl|monDom2|scaffold_2 (42566996-42567173) | |
| 118-233, gnl|oryCun1|scaffold_174976 (38088-38241) | |
| 118-233, gnl|panTro1|chr13 (41292112-41292270) | |
| 118-233, gnl|rheMac2|chr12 (15187408-15187566) | |
| 118-233, gnl|rn3|chr3 (33582286-33582440) | |
| 118-233, gnl|tetNig1|chr2 (18005898-18006029) | |
| 118-233, gnl|xenTro1|scaffold_494 (766863-767025) | |
| 434-545, gnl|bosTau2|chr2 (9276267-9276156) | |
| 434-545, gnl|canFam2|chr19 (55804671-55804790) | |
| 434-545, gnl|echTel1|scaffold_318019 (109690-109554) | |
| 434-545, gnl|fr1|chrUn (158643829-158643960) | |
| 434-545, gnl|galGal2|chr7 (35876021-35876142) | |
| 434-545, gnl|hg17|chr2 (152227874-152228010) | |
| 434-545, gnl|Hg17|chr2 (152228021-152227910) | |
| 434-545, gnl|loxAfr1|scaffold_239 (5141-5277) | |
| 434-545, gnl|mm7|chr2 (52201150-52201287) | |
| 434-545, gnl|Mm7|chr2 (52201298-52201187) | |
| 434-545, gnl|monDom2|scaffold_2 (42565557-42565685) | |
| 434-545, gnl|oryCun1|scaffold_174976 (36308-36445) | |
| 434-545, gnl|panTro1|chr13 (41290352-41290488) | |
| 434-545, gnl|rheMac2|chr12 (15185647-15185783) | |
| 434-545, gnl|rn3|chr3 (33580551-33580688) | |
| 434-545, gnl|xenTro1|scaffold_494 (762789-762928) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 118-233, gnl|bosTau2|chr2 (9277643-9277527) | |
| 118-233, gnl|canFam2|chr19 (55805839-55805997) | |
| 118-233, gnl|danRer3|chr9 (14978708-14978574) | |
| 118-233, gnl|dasNov1|scaffold_185 (63498-63656) | |
| 118-233, gnl|echTel1|scaffold_318019 (107561-107404) | |
| 118-233, gnl|fr1|chrUn (158644313-158644433) | |
| 118-233, gnl|galGal2|chr7 (35876839-35876997) | |
| 118-233, gnl|hg17|chr2 (152229639-152229797) | |
| 118-233, gnl|Hg17|chr2 (152229769-152229653) | |
| 118-233, gnl|loxAfr1|scaffold_239 (7053-7211) | |
| 118-233, gnl|mm7|chr2 (52202918-52203072) | |
| 118-233, gnl|Mm7|chr2 (52203044-52202928) | |
| 118-233, gnl|monDom2|scaffold_2 (42566996-42567173) | |
| 118-233, gnl|oryCun1|scaffold_174976 (38088-38241) | |
| 118-233, gnl|panTro1|chr13 (41292112-41292270) | |
| 118-233, gnl|rheMac2|chr12 (15187408-15187566) | |
| 118-233, gnl|rn3|chr3 (33582286-33582440) | |
| 118-233, gnl|tetNig1|chr2 (18005898-18006029) | |
| 118-233, gnl|xenTro1|scaffold_494 (766863-767025) | |
| 434-545, gnl|bosTau2|chr2 (9276267-9276156) | |
| 434-545, gnl|canFam2|chr19 (55804671-55804790) | |
| 434-545, gnl|echTel1|scaffold_318019 (109690-109554) | |
| 434-545, gnl|fr1|chrUn (158643829-158643960) | |
| 434-545, gnl|galGal2|chr7 (35876021-35876142) | |
| 434-545, gnl|hg17|chr2 (152227874-152228010) | |
| 434-545, gnl|Hg17|chr2 (152228021-152227910) | |
| 434-545, gnl|loxAfr1|scaffold_239 (5141-5277) | |
| 434-545, gnl|mm7|chr2 (52201150-52201287) | |
| 434-545, gnl|Mm7|chr2 (52201298-52201187) | |
| 434-545, gnl|monDom2|scaffold_2 (42565557-42565685) | |
| 434-545, gnl|oryCun1|scaffold_174976 (36308-36445) | |
| 434-545, gnl|panTro1|chr13 (41290352-41290488) | |
| 434-545, gnl|rheMac2|chr12 (15185647-15185783) | |
| 434-545, gnl|rn3|chr3 (33580551-33580688) | |
| 434-545, gnl|xenTro1|scaffold_494 (762789-762928) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) |