rspc006_j13.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAACCTCAGTGAGAGTAGATGGGGCAGATATGGGTATTTGCTATGGAGAATTATCTGTT TATTCCACTTCACATTCCTATGCACTCTGTTGCTTGGGTTAATGAAGCGTTTTCTGCTCA TTATTAATCCAGACTCTTGGATGTAGTGACTAGGACCAAATTCTTGTAACTACCAGTCAT GTGGCATTAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCACACGCATGTG CTTCTGTCTCTTTCCCAACATTCTTTGTCTGTTAAGTGTTGTTCACTTATTTAGTTGGTT AACACGTACTTATTCTTGGTTTAAAAAATTTAATGACAGTTGTGTACTTTTCTCATTTTT GGTATTATTCAAATGTTTATATTTTAATACCTTTAAGCCACTTAAAATTTTTCATGTATA ATTGTAGTTTTAAGAAAAACTATTTTGAACAACCCTAAATATAATGCATCTAGAAACTAA TGTATATTTGAGTAGACATAATTTATAGTGCAACTGTAGGCTATAGTATATGGTAATTTT TCTTTTATTATTAAGATACAATAAAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAACCTCAGTGAGAGTAGATGGGGCAGATATGGGTATTTGCTATGGAGAATTATCTGTT TATTCCACTTCACATTCCTATGCACTCTGTTGCTTGGGTTAATGAAGCGTTTTCTGCTCA TTATTAATCCAGACTCTTGGATGTAGTGACTAGGACCAAATTCTTGTAACTACCAGTCAT GTGGCATTAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCACACGCATGTG CTTCTGTCTCTTTCCCAACATTCTTTGTCTGTTAAGTGTTGTTCACTTATTTAGTTGGTT AACACGTACTTATTCTTGGTTTAAAAAATTTAATGACAGTTGTGTACTTTTCTCATTTTT GGTATTATTCAAATGTTTATATTTTAATACCTTTAAGCCACTTAAAATTTTTCATGTATA ATTGTAGTTTTAAGAAAAACTATTTTGAACAACCCTAAATATAATGCATCTAGAAACTAA TGTATATTTGAGTAGACATAATTTATAGTGCAACTGTAGGCTATAGTATATGGTAATTTT TCTTTTATTATTAAGATACAATAAAGTA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-209, gnl|bosTau2|chr4 (34901513-34901722) | |
| 1-209, gnl|Hg17|chr7 (34743960-34743751) | |
| 243-565, gnl|bosTau2|chr4 (34901718-34902026) | |
| 243-565, gnl|canFam2|chr14 (49619642-49620123) | |
| 243-565, gnl|canFam2|chr14 (49620295-49619810) | |
| 243-565, gnl|echTel1|scaffold_280064 (42019-41587) | |
| 243-565, gnl|echTel1|scaffold_280064 (41433-41886) | |
| 243-565, gnl|hg17|chr7 (34743227-34743711) | |
| 243-565, gnl|hg17|chr7 (32656760-32657259) | |
| 243-565, gnl|Hg17|chr7 (34743755-34743411) | |
| 243-565, gnl|loxAfr1|scaffold_10471 (17388-16922) | |
| 243-565, gnl|loxAfr1|scaffold_10471 (16762-17241) | |
| 243-565, gnl|mm7|chr9 (24296974-24297456) | |
| 243-565, gnl|mm7|chr9 (24297609-24297125) | |
| 243-565, gnl|Mm7|chr9 (24297488-24297142) | |
| 243-565, gnl|monDom2|scaffold_5 (1444367-1444838) | |
| 243-565, gnl|monDom2|scaffold_5 (1445007-1444529) | |
| 243-565, gnl|oryCun1|scaffold_181203 (134667-134167) | |
| 243-565, gnl|oryCun1|scaffold_181203 (133986-134515) | |
| 243-565, gnl|panTro1|chr6 (35906912-35907399) | |
| 243-565, gnl|panTro1|chr6 (33768001-33768550) | |
| 243-565, gnl|rheMac2|chr3 (91242634-91242151) | |
| 243-565, gnl|rheMac2|chr3 (93343911-93343422) | |
| 243-565, gnl|rn3|chr8 (24074148-24074594) | |
| 243-565, gnl|rn3|chr8 (24074744-24074292) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-209, gnl|bosTau2|chr4 (34901513-34901722) | |
| 1-209, gnl|Hg17|chr7 (34743960-34743751) | |
| 243-565, gnl|bosTau2|chr4 (34901718-34902026) | |
| 243-565, gnl|canFam2|chr14 (49619642-49620123) | |
| 243-565, gnl|canFam2|chr14 (49620295-49619810) | |
| 243-565, gnl|echTel1|scaffold_280064 (42019-41587) | |
| 243-565, gnl|echTel1|scaffold_280064 (41433-41886) | |
| 243-565, gnl|hg17|chr7 (34743227-34743711) | |
| 243-565, gnl|hg17|chr7 (32656760-32657259) | |
| 243-565, gnl|Hg17|chr7 (34743755-34743411) | |
| 243-565, gnl|loxAfr1|scaffold_10471 (17388-16922) | |
| 243-565, gnl|loxAfr1|scaffold_10471 (16762-17241) | |
| 243-565, gnl|mm7|chr9 (24296974-24297456) | |
| 243-565, gnl|mm7|chr9 (24297609-24297125) | |
| 243-565, gnl|Mm7|chr9 (24297488-24297142) | |
| 243-565, gnl|monDom2|scaffold_5 (1444367-1444838) | |
| 243-565, gnl|monDom2|scaffold_5 (1445007-1444529) | |
| 243-565, gnl|oryCun1|scaffold_181203 (134667-134167) | |
| 243-565, gnl|oryCun1|scaffold_181203 (133986-134515) | |
| 243-565, gnl|panTro1|chr6 (35906912-35907399) | |
| 243-565, gnl|panTro1|chr6 (33768001-33768550) | |
| 243-565, gnl|rheMac2|chr3 (91242634-91242151) | |
| 243-565, gnl|rheMac2|chr3 (93343911-93343422) | |
| 243-565, gnl|rn3|chr8 (24074148-24074594) | |
| 243-565, gnl|rn3|chr8 (24074744-24074292) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spc (0.113366) |