Non-Coding RNA Search

rspc032_i18.y1

Sequence:


               
               CTGGAGGTCATTAAGAAGGCAAATGATACCTTAAACGGAATCAGTAGTAGTTCTGTATGC
ACAGAGGTAATTCAGTCAGCTCAAGGCATGGAGTATTTATTAGGTATGTTCTTTTATATT
TGACTTATTCAAAATCATGACCCTTTGCAGTCTTTTCGGTTGTGCTGTGTTAAGTAGTTT
AATCTAGATCTCTTAAGCCTCATATGATTTTACTAAGTAGCATCTACATCTGTAGATAAG
ACACTTAAGTCACAGACAAGAACAACTATTTGACTTAAGGTCTCTGGCCAGGTTTCCGAG
TCCTTGTTATACATCTAATAGCAGCAGTATAAAATCATGTTACTGCTTTATCAAAGAGTC
TGAACTAGATGAGGCAAATTATTGGAGAGTTCCCTTGCAGCATAGCGGTTCAGGGTCTGG
TGTTGTCACTGCAGCAGCTCAGGTTGTTGCTGTGACATAGATTCAGTCCCTGTCCCAGGA
ACCGCCACATGCTGTGGGTACAGCAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAGGTCATTAAGAAGGCAAATGATACCTTAAACGGAATCAGTAGTAGTTCTGTATGC
ACAGAGGTAATTCAGTCAGCTCAAGGCATGGAGTATTTATTAGGTATGTTCTTTTATATT
TGACTTATTCAAAATCATGACCCTTTGCAGTCTTTTCGGTTGTGCTGTGTTAAGTAGTTT
AATCTAGATCTCTTAAGCCTCATATGATTTTACTAAGTAGCATCTACATCTGTAGATAAG
ACACTTAAGTCACAGACAAGAACAACTATTTGACTTAAGGTCTCTGGCCAGGTTTCCGAG
TCCTTGTTATACATCTAATAGCAGCAGTATAAAATCATGTTACTGCTTTATCAAAGAGTC
TGAACTAGATGAGGCAAATTATTGGAGAGTTCCCTTGCAGCATAGCGGTTCAGGGTCTGG
TGTTGTCACTGCAGCAGCTCAGGTTGTTGCTGTGACATAGATTCAGTCCCTGTCCCAGGA
ACCGCCACATGCTGTGGGTACAGCAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-197, gnl|bosTau2|chr19 (7023726-7023920)
               

               
               5-197, gnl|Hg17|chr17 (32972637-32972451)
               

               
               5-197, gnl|Mm7|chr11 (84094901-84095061)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-197, gnl|bosTau2|chr19 (7023726-7023920)
               

               
               5-197, gnl|Hg17|chr17 (32972637-32972451)
               

               
               5-197, gnl|Mm7|chr11 (84094901-84095061)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spc (0.113366)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.113366)

	5-197, gnl\|bosTau2\|chr19 (7023726-7023920)
	5-197, gnl\|Hg17\|chr17 (32972637-32972451)
	5-197, gnl\|Mm7\|chr11 (84094901-84095061)