Non-Coding RNA Search

rspl02_h3.y1

Sequence:


               
               GGAGGCCTATGTGCATTTGTCCTGATTGTCTACTATCACGGTACCCGCACCTCAAGATGT
TATTTGATACAAGTGTAGTATTATTTCTGGCTTTTCGAATTAATCTAGGATAGGAAAAGA
TAGAGTCGTATTTTGACAAAAGTCTTTGTTCTTTTAATGTTATTTAGAATTGTAAGTTCT
GTCAGTGACTTCTAAAACCTTGGAATGGCCTCTTTATAGAACCCTGTGGTAGAGAGGCAT
ATGGCCACACTGCCTCTCTAGCTTTATTTTCTCATGTAAGTTTGCAAATGGATCTTCTGA
CTAATGCCTGGGGACTAGAAAACAGTGTGATGGCTAAGATCTCATGACATCATATTTATG
TTTCTGTAAGTTTGTTTAGAATATTTTTAGTATCTTGTGCATTAACCAAGTATTTTTTTG
AGTGTATAACTGAGTATGTATGGATGGCGTGGGGAGAAATTATGTCTCAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGCCTATGTGCATTTGTCCTGATTGTCTACTATCACGGTACCCGCACCTCAAGATGT
TATTTGATACAAGTGTAGTATTATTTCTGGCTTTTCGAATTAATCTAGGATAGGAAAAGA
TAGAGTCGTATTTTGACAAAAGTCTTTGTTCTTTTAATGTTATTTAGAATTGTAAGTTCT
GTCAGTGACTTCTAAAACCTTGGAATGGCCTCTTTATAGAACCCTGTGGTAGAGAGGCAT
ATGGCCACACTGCCTCTCTAGCTTTATTTTCTCATGTAAGTTTGCAAATGGATCTTCTGA
CTAATGCCTGGGGACTAGAAAACAGTGTGATGGCTAAGATCTCATGACATCATATTTATG
TTTCTGTAAGTTTGTTTAGAATATTTTTAGTATCTTGTGCATTAACCAAGTATTTTTTTG
AGTGTATAACTGAGTATGTATGGATGGCGTGGGGAGAAATTATGTCTCAGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-472, gnl|bosTau2|chr8 (50626150-50626635)
               

               
               1-472, gnl|Hg17|chr9 (104625265-104624793)
               

               
               1-472, gnl|Mm7|chr4 (53046889-53046430)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-472, gnl|bosTau2|chr8 (50626150-50626635)
               

               
               1-472, gnl|Hg17|chr9 (104625265-104624793)
               

               
               1-472, gnl|Mm7|chr4 (53046889-53046430)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-472, gnl\|bosTau2\|chr8 (50626150-50626635)
	1-472, gnl\|Hg17\|chr9 (104625265-104624793)
	1-472, gnl\|Mm7\|chr4 (53046889-53046430)