Non-Coding RNA Search

rspl03_l8.y1

Sequence:


               
               CAACAGCTGCTTCAATCCTTTCCTCTATTACTTTGCTGGGGAGAATTTTAAGGACAGACT
AAAGTCTGCACTCAGGAAAGGTCGACCACAGAAAATAAGGTGCGGTTTCTCTGTCTGTGT
GTGGCTGAAAAAGGAAACGAGAGTGTAAGGGATTATTAGGTGAGGCTGTTATTATGTCCT
TGCCCTTGTGTCTACCCTCATTCATGTGTAGTCTCCAAATGAGACACCATTCCCAACAAA
GGTCGAGTCCCAAGATTTAATTGACCCTGACTTTTTTTTGTTTTTTGTTTTTggctatgc
ctatagcatgtgaaagttcctgggccagggatcaaacccatgccataacagcaacctgag
ccattgcaatgaaaaggctgatttcttaacccactgcaccacaagggaactcccCATGAC
TTTTGCTAATAAGACCTACTTCAAATATATCATTAGGTATATCTTCAGTGCTTGAGTCTA
AATAAAGAGTATAGCTTGGAGTTCCCATTGTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACAGCTGCTTCAATCCTTTCCTCTATTACTTTGCTGGGGAGAATTTTAAGGACAGACT
AAAGTCTGCACTCAGGAAAGGTCGACCACAGAAAATAAGGTGCGGTTTCTCTGTCTGTGT
GTGGCTGAAAAAGGAAACGAGAGTGTAAGGGATTATTAGGTGAGGCTGTTATTATGTCCT
TGCCCTTGTGTCTACCCTCATTCATGTGTAGTCTCCAAATGAGACACCATTCCCAACAAA
GGTCGAGTCCCAAGATTTAATTGACCCTGACTTTTTTTTGTTTTTTGTTTTTggctatgc
ctatagcatgtgaaagttcctgggccagggatcaaacccatgccataacagcaacctgag
ccattgcaatgaaaaggctgatttcttaacccactgcaccacaagggaactcccCATGAC
TTTTGCTAATAAGACCTACTTCAAATATATCATTAGGTATATCTTCAGTGCTTGAGTCTA
AATAAAGAGTATAGCTTGGAGTTCCCATTGTGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-277, gnl|bosTau2|chr12 (8988234-8987956)
               

               
               1-277, gnl|Hg17|chr13 (48179842-48180129)
               

               
               1-277, gnl|Mm7|chr14 (67712064-67711778)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-277, gnl|bosTau2|chr12 (8988234-8987956)
               

               
               1-277, gnl|Hg17|chr13 (48179842-48180129)
               

               
               1-277, gnl|Mm7|chr14 (67712064-67711778)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-277, gnl\|bosTau2\|chr12 (8988234-8987956)
	1-277, gnl\|Hg17\|chr13 (48179842-48180129)
	1-277, gnl\|Mm7\|chr14 (67712064-67711778)