Non-Coding RNA Search

rspl17_o10.y1

Sequence:


               
               TCATACCTTTTGGACACAACACTCCAtttttataatgtatattttgaaatactcccttca
ctcttctgaattgaagtgcatagataagagaatctgtctacatacataattcctccaaaa
ccaatataatgtcctaattgaatacaagggagaaggaaaggaataataatttataataaa
acagtatgtatttcagtatgtaaaggctaggatataattccattagaagacataatgaaA
TTGCCTTCACATGATGATGCCTGTACCTGGGAAGGTGACAGCTACACTATGACTCAGACA
CCGCAGATAGGGTGATGCAATTTTCCTAGATGATGAACAGTTCTTCAGAAAGTTCTAAAA
ACAAAATGCAATCTTCCCTCAATTTATATGGTGGTTATTGAATTTCTGGAGCAGTCTTTA
TATATTAAAATCCATGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATACCTTTTGGACACAACACTCCAtttttataatgtatattttgaaatactcccttca
ctcttctgaattgaagtgcatagataagagaatctgtctacatacataattcctccaaaa
ccaatataatgtcctaattgaatacaagggagaaggaaaggaataataatttataataaa
acagtatgtatttcagtatgtaaaggctaggatataattccattagaagacataatgaaA
TTGCCTTCACATGATGATGCCTGTACCTGGGAAGGTGACAGCTACACTATGACTCAGACA
CCGCAGATAGGGTGATGCAATTTTCCTAGATGATGAACAGTTCTTCAGAAAGTTCTAAAA
ACAAAATGCAATCTTCCCTCAATTTATATGGTGGTTATTGAATTTCTGGAGCAGTCTTTA
TATATTAAAATCCATGAT

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               2-199, gnl|bosTau2|chr25 (14020473-14020275)
               

               
               2-199, gnl|canFam2|chrX (44872348-44872725)
               

               
               2-199, gnl|hg17|chrX (53007425-53007809)
               

               
               2-199, gnl|Hg17|chrX (53007626-53007824)
               

               
               2-199, gnl|loxAfr1|scaffold_88541 (9135-8766)
               

               
               2-199, gnl|mm7|chrX (147084822-147084498)
               

               
               2-199, gnl|oryCun1|scaffold_203137 (64616-64987)
               

               
               2-199, gnl|panTro1|chrX (54248821-54249204)
               

               
               2-199, gnl|rheMac2|chrX (51418878-51419254)
               

               
               2-199, gnl|rn3|chrX (41879917-41879586)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-199, gnl|bosTau2|chr25 (14020473-14020275)
               

               
               2-199, gnl|canFam2|chrX (44872348-44872725)
               

               
               2-199, gnl|hg17|chrX (53007425-53007809)
               

               
               2-199, gnl|Hg17|chrX (53007626-53007824)
               

               
               2-199, gnl|loxAfr1|scaffold_88541 (9135-8766)
               

               
               2-199, gnl|mm7|chrX (147084822-147084498)
               

               
               2-199, gnl|oryCun1|scaffold_203137 (64616-64987)
               

               
               2-199, gnl|panTro1|chrX (54248821-54249204)
               

               
               2-199, gnl|rheMac2|chrX (51418878-51419254)
               

               
               2-199, gnl|rn3|chrX (41879917-41879586)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	2-199, gnl\|bosTau2\|chr25 (14020473-14020275)
	2-199, gnl\|canFam2\|chrX (44872348-44872725)
	2-199, gnl\|hg17\|chrX (53007425-53007809)
	2-199, gnl\|Hg17\|chrX (53007626-53007824)
	2-199, gnl\|loxAfr1\|scaffold_88541 (9135-8766)
	2-199, gnl\|mm7\|chrX (147084822-147084498)
	2-199, gnl\|oryCun1\|scaffold_203137 (64616-64987)
	2-199, gnl\|panTro1\|chrX (54248821-54249204)
	2-199, gnl\|rheMac2\|chrX (51418878-51419254)
	2-199, gnl\|rn3\|chrX (41879917-41879586)