Non-Coding RNA Search

rspl19_b21.y1

Sequence:


               
               TAACATTATGTCACAAGCATTTACCCATGCCATGAAAATACCTTCAGAAGGTAGTATTAA
GTTACTACAGAATGTTCCCTCCTATATAGATGAGTCATAATCTACATAACCAATCCCAGA
TCAGACATTCAGATTATATCCAAGGTTCATTATAATAATAAGCATCCCTGATATAAGCTT
GTATGCACATAAAGCTCTATTTGCATTTCAGATCAGGTCTTGAGGCCAGATTTGAGGAAG
AGGAATTACTGGTCAAATGTCATGAACAGTTTTCAAGCTCTTGCTATTCAAGGCTAGTTT
ATATTCCAAGTGACATTGCCCCAGTGTGGGCTTCACCGGCAGAACATGGGACATTGATCT
TTATGGGCCGCTCACTGTCTTTATGTTCTCTCTCTTTCCCTTAACTTTGCCAGTTTACCC
TGTTATCCCTTTGTCTTCATCTAAACCTATCTTCCAGATCAGAGAGACCTGGGGAAGGAA
TGGAAAGAGAAATGGATTTGTTGCATTGAGCCCCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAACATTATGTCACAAGCATTTACCCATGCCATGAAAATACCTTCAGAAGGTAGTATTAA
GTTACTACAGAATGTTCCCTCCTATATAGATGAGTCATAATCTACATAACCAATCCCAGA
TCAGACATTCAGATTATATCCAAGGTTCATTATAATAATAAGCATCCCTGATATAAGCTT
GTATGCACATAAAGCTCTATTTGCATTTCAGATCAGGTCTTGAGGCCAGATTTGAGGAAG
AGGAATTACTGGTCAAATGTCATGAACAGTTTTCAAGCTCTTGCTATTCAAGGCTAGTTT
ATATTCCAAGTGACATTGCCCCAGTGTGGGCTTCACCGGCAGAACATGGGACATTGATCT
TTATGGGCCGCTCACTGTCTTTATGTTCTCTCTCTTTCCCTTAACTTTGCCAGTTTACCC
TGTTATCCCTTTGTCTTCATCTAAACCTATCTTCCAGATCAGAGAGACCTGGGGAAGGAA
TGGAAAGAGAAATGGATTTGTTGCATTGAGCCCCTCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-515, gnl|bosTau2|chr29 (12019553-12020032)
               

               
               3-515, gnl|Hg17|chr11 (78972271-78971758)
               

               
               3-515, gnl|Mm7|chr7 (92075989-92076383)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-515, gnl|bosTau2|chr29 (12019553-12020032)
               

               
               3-515, gnl|Hg17|chr11 (78972271-78971758)
               

               
               3-515, gnl|Mm7|chr7 (92075989-92076383)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	3-515, gnl\|bosTau2\|chr29 (12019553-12020032)
	3-515, gnl\|Hg17\|chr11 (78972271-78971758)
	3-515, gnl\|Mm7\|chr7 (92075989-92076383)