Non-Coding RNA Search

rspl22_e9.y1

Sequence:


               
               ATGATTCGAAGTTTCCTATAGAAGATACCCCTTTGGTGCCAGTGAGTTCTGTTTTTACTC
CTTTTTGCTCCTTTAAAAATTATGATTGGTTTTACTTTTAGGTTTGCAGCATGATGGTGG
AAACTTAATTTTTTCACGTTTCTCTCCATTTCAATGACATTTGCTTCTTGCTAAAACATT
GAATAGTAGAACTTGATGATTATTAAGGCTGATGTGGTTTTACTTTCTGGTTAATAGTCA
CCTAATCCCGGTGAAGGTCTATTGTCATAGGCTGTTTTGAGTAACTCACAGAGTCTTGTA
TTTTGTAGTTTTGTTGAGTAGAATACTGACAATTCCTAAGAGAAGATTTCTATACAGAAG
TGTCTTGTCAATTGTGTGCTCTCCTGTTGGCTACATGCTGAAATCCTAGCCCCTTAGACA
ACCCTGTCTCTTGCTTTGAAGACAGGTCTGGTAAAAATATGTAAATGTCAGAAACAAGTG
CATTAGCCTCACTGGAAATACTATCCATTTTCGTTAATATTCTATTAGCAATTGATAACG
TGTGCTTGAAATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGATTCGAAGTTTCCTATAGAAGATACCCCTTTGGTGCCAGTGAGTTCTGTTTTTACTC
CTTTTTGCTCCTTTAAAAATTATGATTGGTTTTACTTTTAGGTTTGCAGCATGATGGTGG
AAACTTAATTTTTTCACGTTTCTCTCCATTTCAATGACATTTGCTTCTTGCTAAAACATT
GAATAGTAGAACTTGATGATTATTAAGGCTGATGTGGTTTTACTTTCTGGTTAATAGTCA
CCTAATCCCGGTGAAGGTCTATTGTCATAGGCTGTTTTGAGTAACTCACAGAGTCTTGTA
TTTTGTAGTTTTGTTGAGTAGAATACTGACAATTCCTAAGAGAAGATTTCTATACAGAAG
TGTCTTGTCAATTGTGTGCTCTCCTGTTGGCTACATGCTGAAATCCTAGCCCCTTAGACA
ACCCTGTCTCTTGCTTTGAAGACAGGTCTGGTAAAAATATGTAAATGTCAGAAACAAGTG
CATTAGCCTCACTGGAAATACTATCCATTTTCGTTAATATTCTATTAGCAATTGATAACG
TGTGCTTGAAATTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-555, gnl|bosTau2|chr7 (35235786-35236340)
               

               
               1-555, gnl|Hg17|chr5 (140775322-140775978)
               

               
               1-555, gnl|Mm7|chr18 (38125766-38126402)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-555, gnl|bosTau2|chr7 (35235786-35236340)
               

               
               1-555, gnl|Hg17|chr5 (140775322-140775978)
               

               
               1-555, gnl|Mm7|chr18 (38125766-38126402)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-555, gnl\|bosTau2\|chr7 (35235786-35236340)
	1-555, gnl\|Hg17\|chr5 (140775322-140775978)
	1-555, gnl\|Mm7\|chr18 (38125766-38126402)