Non-Coding RNA Search

rspl24_e3.y1

Sequence:


               
               TATGACTTAAGGTCATACTTTCTGACATGAGTACCCCAGTGTAGTCTGCACAAAATTAGA
TCCCCTCTTCTAATCATGCTTTATACCATTTTCTTTGAAGTTCTAACCAAAACAAATCAT
CTAGCCCTTGCCCTTTTAAACTAATATTGAATAATGTTGTTAAAATTATGGAAGTAATAT
ATTACCCATCATAAAACATTGAAAAACACTAAGAGGCTAAACATCATGCATAGTCCAGCC
ATGCAGATTTATATTAAAGAATAGTAAGTACATAATTTTAACATTTCCAGCTAACATCTC
TTTCCTCTTAGGCAAAAAATCACAGTTGAATAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGACTTAAGGTCATACTTTCTGACATGAGTACCCCAGTGTAGTCTGCACAAAATTAGA
TCCCCTCTTCTAATCATGCTTTATACCATTTTCTTTGAAGTTCTAACCAAAACAAATCAT
CTAGCCCTTGCCCTTTTAAACTAATATTGAATAATGTTGTTAAAATTATGGAAGTAATAT
ATTACCCATCATAAAACATTGAAAAACACTAAGAGGCTAAACATCATGCATAGTCCAGCC
ATGCAGATTTATATTAAAGAATAGTAAGTACATAATTTTAACATTTCCAGCTAACATCTC
TTTCCTCTTAGGCAAAAAATCACAGTTGAATAGA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-332, gnl|bosTau2|chr8 (42171883-42172207)
               

               
               1-332, gnl|canFam2|chr1 (79238231-79237550)
               

               
               1-332, gnl|dasNov1|scaffold_16110 (7774-8460)
               

               
               1-332, gnl|echTel1|scaffold_208016 (2425-1791)
               

               
               1-332, gnl|hg17|chr9 (83089896-83090578)
               

               
               1-332, gnl|Hg17|chr9 (83090285-83089953)
               

               
               1-332, gnl|loxAfr1|scaffold_18784 (33268-32621)
               

               
               1-332, gnl|monDom2|scaffold_17 (51751973-51751327)
               

               
               1-332, gnl|oryCun1|scaffold_199286 (122340-121719)
               

               
               1-332, gnl|panTro1|chr11 (67043447-67044127)
               

               
               1-332, gnl|rheMac2|chr15 (91953628-91954307)
               

               
               1-332, gnl|rn3|chr5 (91979005-91978450)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-332, gnl|bosTau2|chr8 (42171883-42172207)
               

               
               1-332, gnl|canFam2|chr1 (79238231-79237550)
               

               
               1-332, gnl|dasNov1|scaffold_16110 (7774-8460)
               

               
               1-332, gnl|echTel1|scaffold_208016 (2425-1791)
               

               
               1-332, gnl|hg17|chr9 (83089896-83090578)
               

               
               1-332, gnl|Hg17|chr9 (83090285-83089953)
               

               
               1-332, gnl|loxAfr1|scaffold_18784 (33268-32621)
               

               
               1-332, gnl|monDom2|scaffold_17 (51751973-51751327)
               

               
               1-332, gnl|oryCun1|scaffold_199286 (122340-121719)
               

               
               1-332, gnl|panTro1|chr11 (67043447-67044127)
               

               
               1-332, gnl|rheMac2|chr15 (91953628-91954307)
               

               
               1-332, gnl|rn3|chr5 (91979005-91978450)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-332, gnl\|bosTau2\|chr8 (42171883-42172207)
	1-332, gnl\|canFam2\|chr1 (79238231-79237550)
	1-332, gnl\|dasNov1\|scaffold_16110 (7774-8460)
	1-332, gnl\|echTel1\|scaffold_208016 (2425-1791)
	1-332, gnl\|hg17\|chr9 (83089896-83090578)
	1-332, gnl\|Hg17\|chr9 (83090285-83089953)
	1-332, gnl\|loxAfr1\|scaffold_18784 (33268-32621)
	1-332, gnl\|monDom2\|scaffold_17 (51751973-51751327)
	1-332, gnl\|oryCun1\|scaffold_199286 (122340-121719)
	1-332, gnl\|panTro1\|chr11 (67043447-67044127)
	1-332, gnl\|rheMac2\|chr15 (91953628-91954307)
	1-332, gnl\|rn3\|chr5 (91979005-91978450)