rspl27_p5.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGCTGATCAGACTGGATGTTTGGAAATGTCTCCCCTCAAGAACATTAGCTTTTGAAAC CGAGCAGAGTGCTTCTGGTTATAGGTCAAGCAGAGAGAGAATTATTATTATGTGTTGTGC AAATGCCACAGGTTTACACAAACTTAATCTTTGTGTGGTGGGAAAAGCCAAAAAACCTCG TGCATTCAAAGGAGCTGACCTTTCAAACCTTCCTGTCACTTATTTCAGTCAAAAGAGTGC ATGGATAGAACACTCTGTTTTCCGACAGTGGTTTGAGAAATACTTTGTGCCACAGGTGCA GAAACATTTGAAATCCAAGGGGCTTCTAGAAAAAGCCGTGCTGCTTTTGGATTTCCCCCC GGCGCATCCAGACGAAGAACTGCTGAGGTCAGATGACGGCAGAATAATTGTGAAATATTT ACCACCAAATGTCACCAGTCTCATTCAGCCTATGAGCCAAGGCGTTCTAGCCACAGTGAA A |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGCTGATCAGACTGGATGTTTGGAAATGTCTCCCCTCAAGAACATTAGCTTTTGAAAC CGAGCAGAGTGCTTCTGGTTATAGGTCAAGCAGAGAGAGAATTATTATTATGTGTTGTGC AAATGCCACAGGTTTACACAAACTTAATCTTTGTGTGGTGGGAAAAGCCAAAAAACCTCG TGCATTCAAAGGAGCTGACCTTTCAAACCTTCCTGTCACTTATTTCAGTCAAAAGAGTGC ATGGATAGAACACTCTGTTTTCCGACAGTGGTTTGAGAAATACTTTGTGCCACAGGTGCA GAAACATTTGAAATCCAAGGGGCTTCTAGAAAAAGCCGTGCTGCTTTTGGATTTCCCCCC GGCGCATCCAGACGAAGAACTGCTGAGGTCAGATGACGGCAGAATAATTGTGAAATATTT ACCACCAAATGTCACCAGTCTCATTCAGCCTATGAGCCAAGGCGTTCTAGCCACAGTGAA A |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 158-481, - strand, RNAz p=0.939192 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 158-481, - strand, RNAz p=0.939192 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-481, gnl|bosTau2|chr6 (15733343-15732861) | |
| 1-481, gnl|Hg17|chr4 (90391826-90392308) | |
| 1-481, gnl|Mm7|chr6 (59179195-59179677) | |
| 4-480, gnl|bosTau2|chr11 (28034232-28034710) | |
| 4-480, gnl|Hg17|chr11 (95763987-95764465) | |
| 4-480, gnl|Mm7|chrUn_random (11374300-11373822) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-481, gnl|bosTau2|chr6 (15733343-15732861) | |
| 1-481, gnl|Hg17|chr4 (90391826-90392308) | |
| 1-481, gnl|Mm7|chr6 (59179195-59179677) | |
| 4-480, gnl|bosTau2|chr11 (28034232-28034710) | |
| 4-480, gnl|Hg17|chr11 (95763987-95764465) | |
| 4-480, gnl|Mm7|chrUn_random (11374300-11373822) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.143184) |