Non-Coding RNA Search

rspl30_k17.y1

Sequence:


               
               GCATATTAGCTAGAGCTCATATTATTTTACTGACAACTTTTTTCTTTCTTATGGTCAGCA
CATCATTCTCCTCATCATAGCTAATCAGCACCAGTGGCCTGTTGTATCCCCGGCACTGTC
CTTAGAGTCTCCTAAGTCTAAGTCTGCACAGTTTTCCATCCTCCAGGCCAAGGAGTAAGA
GTGAAAGAAAATCAGGTCGTGACCAAGGTTACAAAGTTCATAGTCATGAGAATAAAATAC
TGCTCTCACCATGCCTTTTCTGCTAAAGCTGGATTCAGAAATTTGCTGGGGTCAGGGGAT
GGAAATTCACAGTGAAAATGTCTCTGTGTGCTAATTTTCACACCATGATGAAAAAATCTT
TTCCTGGAACTTGGAGGCATTTTTGCCATTGAAATGCAATTTGTAAATTTTGCTGTAGCT
ATTGCCCTGTGGGGATTCTGGTTGATAGCCTCAGAAGTGTTATTTCTCTGCTGTATCAGT
CTGTCAATTTTAGCCACTCACTTCTGACCTTGAATCAGACAAAACTCCACAAAGACAGCA
ACAGAAAAAAACCTAGCAGGCCAGAAGTCATGTGGGAATGGGGCCAGACCTCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATATTAGCTAGAGCTCATATTATTTTACTGACAACTTTTTTCTTTCTTATGGTCAGCA
CATCATTCTCCTCATCATAGCTAATCAGCACCAGTGGCCTGTTGTATCCCCGGCACTGTC
CTTAGAGTCTCCTAAGTCTAAGTCTGCACAGTTTTCCATCCTCCAGGCCAAGGAGTAAGA
GTGAAAGAAAATCAGGTCGTGACCAAGGTTACAAAGTTCATAGTCATGAGAATAAAATAC
TGCTCTCACCATGCCTTTTCTGCTAAAGCTGGATTCAGAAATTTGCTGGGGTCAGGGGAT
GGAAATTCACAGTGAAAATGTCTCTGTGTGCTAATTTTCACACCATGATGAAAAAATCTT
TTCCTGGAACTTGGAGGCATTTTTGCCATTGAAATGCAATTTGTAAATTTTGCTGTAGCT
ATTGCCCTGTGGGGATTCTGGTTGATAGCCTCAGAAGTGTTATTTCTCTGCTGTATCAGT
CTGTCAATTTTAGCCACTCACTTCTGACCTTGAATCAGACAAAACTCCACAAAGACAGCA
ACAGAAAAAAACCTAGCAGGCCAGAAGTCATGTGGGAATGGGGCCAGACCTCACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               72-594, gnl|bosTau2|chr2 (67512880-67513392)
               

               
               72-594, gnl|Hg17|chr2 (225471323-225470469)
               

               
               72-594, gnl|Mm7|chr1 (80732990-80732455)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-594, gnl|bosTau2|chr2 (67512880-67513392)
               

               
               72-594, gnl|Hg17|chr2 (225471323-225470469)
               

               
               72-594, gnl|Mm7|chr1 (80732990-80732455)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	72-594, gnl\|bosTau2\|chr2 (67512880-67513392)
	72-594, gnl\|Hg17\|chr2 (225471323-225470469)
	72-594, gnl\|Mm7\|chr1 (80732990-80732455)