Non-Coding RNA Search

rspl30_k3.y1

Sequence:


               
               AAAATCTGAACTTGTATAAACCAAAAAGGATATCAATTGGCACATATACCTAAGAAGATC
AAGAGATGGAGTGGCTTCTTGTATGACTCTATGCAGAGATTTGACCAATGTCATCTGGAG
GACATCTGTCTTCCCTGTCTCTGGACCCTACTTTCTTTGTGGTGATTTTACTCCAGGCAG
CTCTTCCTAAGCTATAACAAGTGATGGTTTATATTCTTCCAGTTTAACAGCTCAGTGGAA
AAACACCTCTTTCCCAGTAGTTACAGCAAAAGTGCTGGTCTTACTGGCCTGAATCATGTG
CCAATTCTGAGGCAATTGCTATGGCAAGGGGGATGGAAATTCTTAGTTGTTTAAGCCTGT
GTCATGTGCCCATCCCTGGAGCTCAGTGGGGAAGCCAGCCCTACTTGACCTGCATGAACC
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATCTGAACTTGTATAAACCAAAAAGGATATCAATTGGCACATATACCTAAGAAGATC
AAGAGATGGAGTGGCTTCTTGTATGACTCTATGCAGAGATTTGACCAATGTCATCTGGAG
GACATCTGTCTTCCCTGTCTCTGGACCCTACTTTCTTTGTGGTGATTTTACTCCAGGCAG
CTCTTCCTAAGCTATAACAAGTGATGGTTTATATTCTTCCAGTTTAACAGCTCAGTGGAA
AAACACCTCTTTCCCAGTAGTTACAGCAAAAGTGCTGGTCTTACTGGCCTGAATCATGTG
CCAATTCTGAGGCAATTGCTATGGCAAGGGGGATGGAAATTCTTAGTTGTTTAAGCCTGT
GTCATGTGCCCATCCCTGGAGCTCAGTGGGGAAGCCAGCCCTACTTGACCTGCATGAACC
G

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               2-399, gnl|bosTau2|chr19 (9766644-9767041)
               

               
               2-399, gnl|canFam2|chr9 (44900288-44899592)
               

               
               2-399, gnl|hg17|chr17 (26620516-26621262)
               

               
               2-399, gnl|Hg17|chr17 (26620662-26621071)
               

               
               2-399, gnl|panTro1|chr19 (30064849-30065596)
               

               
               2-399, gnl|rheMac2|chr16 (26442888-26443635)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-399, gnl|bosTau2|chr19 (9766644-9767041)
               

               
               2-399, gnl|canFam2|chr9 (44900288-44899592)
               

               
               2-399, gnl|hg17|chr17 (26620516-26621262)
               

               
               2-399, gnl|Hg17|chr17 (26620662-26621071)
               

               
               2-399, gnl|panTro1|chr19 (30064849-30065596)
               

               
               2-399, gnl|rheMac2|chr16 (26442888-26443635)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	2-399, gnl\|bosTau2\|chr19 (9766644-9767041)
	2-399, gnl\|canFam2\|chr9 (44900288-44899592)
	2-399, gnl\|hg17\|chr17 (26620516-26621262)
	2-399, gnl\|Hg17\|chr17 (26620662-26621071)
	2-399, gnl\|panTro1\|chr19 (30064849-30065596)
	2-399, gnl\|rheMac2\|chr16 (26442888-26443635)