Non-Coding RNA Search

rspl32_p5.y1

Sequence:


               
               TGGCTCACTTCCTCTGAGACTTTAAACTCAACTGTCACCTTCCTTAGTGGGCTCCTACTA
TTTAAACAATAGGTAAAAGGACTTAGCTGTTCTATTTAAATTGAAATATCCTCTTTTTTT
ACCCCTCCCCCAACACACACACGTTTCTTCCTGCTTTATTTTTTACTATAGTACAATCTA
AAGAGAACCATCTAATATACATTTGGTTTATCTTGTATATATTTACTTTTTTAATCTTGC
TTACTATATGTCTCCTCCACTAAAAGGCAGCTCCACAGGAGCAGAGAATTTTATCTGTGT
TGTTCACTCCTGTTTCCCCAGTGCTTAGAATAATATTAGACACTCCACAAATATTTATTG
AATGAATGAATGGACTGAATTGAATGCGTTTACAATGCCGTTGCCAACACAAGTCAATTC
AACATTTGGGACAGAAGAAACCAAAGGAATTGATCTTGCTACTACTGTTCCATTTTAGGA
GAAATGGTGACAGTATTTGGTCACTAGGTAGGGAAATTTGGAATGATGTGTTCATAAAGA
TAAATTGCCTTCCCTGAGAGATGAGAGATCTGCTTTAAAGGTCCTGTGTTAGAAATCTAG
GATTAAATGTTTGGCTGATCAAAAAGGTCAAGTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCTCACTTCCTCTGAGACTTTAAACTCAACTGTCACCTTCCTTAGTGGGCTCCTACTA
TTTAAACAATAGGTAAAAGGACTTAGCTGTTCTATTTAAATTGAAATATCCTCTTTTTTT
ACCCCTCCCCCAACACACACACGTTTCTTCCTGCTTTATTTTTTACTATAGTACAATCTA
AAGAGAACCATCTAATATACATTTGGTTTATCTTGTATATATTTACTTTTTTAATCTTGC
TTACTATATGTCTCCTCCACTAAAAGGCAGCTCCACAGGAGCAGAGAATTTTATCTGTGT
TGTTCACTCCTGTTTCCCCAGTGCTTAGAATAATATTAGACACTCCACAAATATTTATTG
AATGAATGAATGGACTGAATTGAATGCGTTTACAATGCCGTTGCCAACACAAGTCAATTC
AACATTTGGGACAGAAGAAACCAAAGGAATTGATCTTGCTACTACTGTTCCATTTTAGGA
GAAATGGTGACAGTATTTGGTCACTAGGTAGGGAAATTTGGAATGATGTGTTCATAAAGA
TAAATTGCCTTCCCTGAGAGATGAGAGATCTGCTTTAAAGGTCCTGTGTTAGAAATCTAG
GATTAAATGTTTGGCTGATCAAAAAGGTCAAGTATC

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               4-138, gnl|bosTau2|chr1 (41065088-41065220)
               

               
               4-138, gnl|Mm7|chr16 (38385963-38385821)
               


               
               162-636, gnl|bosTau2|chr1 (41065628-41066106)
               

               
               162-636, gnl|Hg17|chr3 (120529152-120529638)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-138, gnl|bosTau2|chr1 (41065088-41065220)
               

               
               4-138, gnl|Mm7|chr16 (38385963-38385821)
               


               
               162-636, gnl|bosTau2|chr1 (41065628-41066106)
               

               
               162-636, gnl|Hg17|chr3 (120529152-120529638)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	4-138, gnl\|bosTau2\|chr1 (41065088-41065220)
	4-138, gnl\|Mm7\|chr16 (38385963-38385821)

	162-636, gnl\|bosTau2\|chr1 (41065628-41066106)
	162-636, gnl\|Hg17\|chr3 (120529152-120529638)