Non-Coding RNA Search

rspl35_i5.y1

Sequence:


               
               CAGAAGGAACATGAAACAGAATACATTTCTTATTTGTTTTATGACTGCTTCTCCCTATGT
GAAATTTTTCCAAAATTAACAATACTATTTCAGTACTAAACTAGAAAAGAGAAAAAATAA
GAAATAAAAATAAGGGAAAATCACTATTGCTATGGTAGATAAAAGACTTTTTTAGATGAA
ATAACCAAAAAAAAAAAAAATCTCAAAAATAGGAGAGAGGCTATTTCAAGATAATATGAA
ATATTAATCACATTTAGTTCCCATCCCTAGCAGTTGACTTTGATCCAAATGTTATTGTAC
ATACTGGAAGATAAACTATCCTTTAAAAAGAAGTACAGAGAAACATGTAGCTGCTGTGAC
CACAAGTAATAAGGAAATGTCACCCAACGAGCTGTGAAAACCTTTGCTATTTCAAAGTGT
AAATACATAGATTTCTTCTCTGCAATAGGCACTCCTGTGGAGCACTCTGGAAACATTTTC
CATTTCATAATGAAAGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAAGGAACATGAAACAGAATACATTTCTTATTTGTTTTATGACTGCTTCTCCCTATGT
GAAATTTTTCCAAAATTAACAATACTATTTCAGTACTAAACTAGAAAAGAGAAAAAATAA
GAAATAAAAATAAGGGAAAATCACTATTGCTATGGTAGATAAAAGACTTTTTTAGATGAA
ATAACCAAAAAAAAAAAAAATCTCAAAAATAGGAGAGAGGCTATTTCAAGATAATATGAA
ATATTAATCACATTTAGTTCCCATCCCTAGCAGTTGACTTTGATCCAAATGTTATTGTAC
ATACTGGAAGATAAACTATCCTTTAAAAAGAAGTACAGAGAAACATGTAGCTGCTGTGAC
CACAAGTAATAAGGAAATGTCACCCAACGAGCTGTGAAAACCTTTGCTATTTCAAAGTGT
AAATACATAGATTTCTTCTCTGCAATAGGCACTCCTGTGGAGCACTCTGGAAACATTTTC
CATTTCATAATGAAAGGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-499, gnl|bosTau2|chr13 (14201758-14201267)
               

               
               5-499, gnl|Hg17|chr10 (25315930-25315436)
               

               
               5-499, gnl|Mm7|chr2 (21251692-21251215)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-499, gnl|bosTau2|chr13 (14201758-14201267)
               

               
               5-499, gnl|Hg17|chr10 (25315930-25315436)
               

               
               5-499, gnl|Mm7|chr2 (21251692-21251215)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	5-499, gnl\|bosTau2\|chr13 (14201758-14201267)
	5-499, gnl\|Hg17\|chr10 (25315930-25315436)
	5-499, gnl\|Mm7\|chr2 (21251692-21251215)