rssp19_c5.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAAGAGCATGCAGAGTCTGGGCAGCTGCACCATCAGCAAGGATTCCTTCCAGATCTCAA CGCTCGTGTGCTCCACCAAACTGACGCAGAATGTGGACCTGCTGGGGCTGCTCAAGTGGC GATCCAACACGAACCTGCTGCAGCAGAACTTGAGGCAGTTGATGAAAGTCGACGGGGGCG AAGTGGTGAAGTTCCTGCAGGACACCTTGGATGCGCTCTTCAACATCATGATGGAAAACT CGGAGAGCGAGACCTTTGATACCCTGGTGTTTGATGCTCTGGTATTTATCATTGGACTAA TCGCTGATAGAAAATTTCAGCATTTTAACCCGGTTTTGGAAACCTACATTAAGAAGCACT TCAGCGCAACCCTAGCCTACACGAAGCTGACCAAAGTGCTAAGGAGCTATGTGGACAACG CGGAGAAGCCGGGCATCAGCGACCAGCTGTACAAAGCCGTGAAGGCCCTGGAGTACATCT TCAAGTTCATTGTGCGCTCCCGGGTCCTGTTCAATCAGCTCTATGAGAACAAAGGAGAGG CCGATTTCGTGGAGTCCCTGGTGCAGCTGTTCCGATCCATCAGCGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAAGAGCATGCAGAGTCTGGGCAGCTGCACCATCAGCAAGGATTCCTTCCAGATCTCAA CGCTCGTGTGCTCCACCAAACTGACGCAGAATGTGGACCTGCTGGGGCTGCTCAAGTGGC GATCCAACACGAACCTGCTGCAGCAGAACTTGAGGCAGTTGATGAAAGTCGACGGGGGCG AAGTGGTGAAGTTCCTGCAGGACACCTTGGATGCGCTCTTCAACATCATGATGGAAAACT CGGAGAGCGAGACCTTTGATACCCTGGTGTTTGATGCTCTGGTATTTATCATTGGACTAA TCGCTGATAGAAAATTTCAGCATTTTAACCCGGTTTTGGAAACCTACATTAAGAAGCACT TCAGCGCAACCCTAGCCTACACGAAGCTGACCAAAGTGCTAAGGAGCTATGTGGACAACG CGGAGAAGCCGGGCATCAGCGACCAGCTGTACAAAGCCGTGAAGGCCCTGGAGTACATCT TCAAGTTCATTGTGCGCTCCCGGGTCCTGTTCAATCAGCTCTATGAGAACAAAGGAGAGG CCGATTTCGTGGAGTCCCTGGTGCAGCTGTTCCGATCCATCAGCGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 281-389, gnl|bosTau2|chr26 (32465252-32465143) | |
| 281-389, gnl|canFam2|chr28 (39015237-39015386) | |
| 281-389, gnl|danRer3|chrNA (196647175-196647325) | |
| 281-389, gnl|dasNov1|scaffold_22305 (49359-49210) | |
| 281-389, gnl|echTel1|scaffold_287135 (21374-21488) | |
| 281-389, gnl|fr1|chrUn (149966752-149966888) | |
| 281-389, gnl|galGal2|chrUn (139620323-139620174) | |
| 281-389, gnl|hg17|chr10 (128731289-128731439) | |
| 281-389, gnl|Hg17|chr10 (128731317-128731426) | |
| 281-389, gnl|loxAfr1|scaffold_45494 (28677-28528) | |
| 281-389, gnl|mm7|chr7 (131187613-131187763) | |
| 281-389, gnl|Mm7|chr7 (131187640-131187749) | |
| 281-389, gnl|monDom2|scaffold_144 (2076225-2076348) | |
| 281-389, gnl|oryCun1|scaffold_206987 (131220-131071) | |
| 281-389, gnl|panTro1|chr8 (131316789-131316939) | |
| 281-389, gnl|rheMac2|chr9 (126669418-126669568) | |
| 281-389, gnl|rn3|chr1 (194456433-194456583) | |
| 281-389, gnl|tetNig1|chr2_random (1980520-1980641) | |
| 281-389, gnl|xenTro1|scaffold_47 (2216886-2216754) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 281-389, gnl|bosTau2|chr26 (32465252-32465143) | |
| 281-389, gnl|canFam2|chr28 (39015237-39015386) | |
| 281-389, gnl|danRer3|chrNA (196647175-196647325) | |
| 281-389, gnl|dasNov1|scaffold_22305 (49359-49210) | |
| 281-389, gnl|echTel1|scaffold_287135 (21374-21488) | |
| 281-389, gnl|fr1|chrUn (149966752-149966888) | |
| 281-389, gnl|galGal2|chrUn (139620323-139620174) | |
| 281-389, gnl|hg17|chr10 (128731289-128731439) | |
| 281-389, gnl|Hg17|chr10 (128731317-128731426) | |
| 281-389, gnl|loxAfr1|scaffold_45494 (28677-28528) | |
| 281-389, gnl|mm7|chr7 (131187613-131187763) | |
| 281-389, gnl|Mm7|chr7 (131187640-131187749) | |
| 281-389, gnl|monDom2|scaffold_144 (2076225-2076348) | |
| 281-389, gnl|oryCun1|scaffold_206987 (131220-131071) | |
| 281-389, gnl|panTro1|chr8 (131316789-131316939) | |
| 281-389, gnl|rheMac2|chr9 (126669418-126669568) | |
| 281-389, gnl|rn3|chr1 (194456433-194456583) | |
| 281-389, gnl|tetNig1|chr2_random (1980520-1980641) | |
| 281-389, gnl|xenTro1|scaffold_47 (2216886-2216754) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) |