Non-Coding RNA Search

rssp19_i6.y1

Sequence:


               
               GGCTACCGCCTTGGAGCTGCACCAGAGGAAGAGTCTGCTTATGTGGCAGGCGAACGGAGA
CGGCATTCTGGCCAAGATGTGAGTGTGCATCCACCTTCTTTAAGGAAGCTTGTGAACTGT
TTTATCATTTTTCAGGAGAAATCGATCCCTTGTTACTTGTGAATCAGTAGCCTCTGAAAG
GAAAGAGGCAGCACCTTTGTTGTCATCTATGAATGGAAAGGCTTACCTGAGACTCAAAGA
CAGCTCTGATCTGGCTGGAGGGGGCACAGGGGGCTTCATCTGTCCATGGGCAAAGCAGAT
GGACAGATGAAGGTTTCTGAGCATTCCATGGACGTCAGGCAGAGGAAAAGTGATTCCAGG
GTTTTCTGCTCCTGTGGACATAGCTAAGGAACTTGGTCTCCAGACCACCCAAGGAGGCCT
GAAACACAACTTTTTAATTTTTTTTTCCTTATTGCCATCCAGTCCTTTTTTCCCCATGCA
TAGGGATCTTCCCCCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTACCGCCTTGGAGCTGCACCAGAGGAAGAGTCTGCTTATGTGGCAGGCGAACGGAGA
CGGCATTCTGGCCAAGATGTGAGTGTGCATCCACCTTCTTTAAGGAAGCTTGTGAACTGT
TTTATCATTTTTCAGGAGAAATCGATCCCTTGTTACTTGTGAATCAGTAGCCTCTGAAAG
GAAAGAGGCAGCACCTTTGTTGTCATCTATGAATGGAAAGGCTTACCTGAGACTCAAAGA
CAGCTCTGATCTGGCTGGAGGGGGCACAGGGGGCTTCATCTGTCCATGGGCAAAGCAGAT
GGACAGATGAAGGTTTCTGAGCATTCCATGGACGTCAGGCAGAGGAAAAGTGATTCCAGG
GTTTTCTGCTCCTGTGGACATAGCTAAGGAACTTGGTCTCCAGACCACCCAAGGAGGCCT
GAAACACAACTTTTTAATTTTTTTTTCCTTATTGCCATCCAGTCCTTTTTTCCCCATGCA
TAGGGATCTTCCCCCCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-410, gnl|bosTau2|chr13 (41221626-41222033)
               

               
               1-410, gnl|Hg17|chr20 (1382935-1382526)
               

               
               1-410, gnl|Mm7|chr2 (151244983-151245341)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-410, gnl|bosTau2|chr13 (41221626-41222033)
               

               
               1-410, gnl|Hg17|chr20 (1382935-1382526)
               

               
               1-410, gnl|Mm7|chr2 (151244983-151245341)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	1-410, gnl\|bosTau2\|chr13 (41221626-41222033)
	1-410, gnl\|Hg17\|chr20 (1382935-1382526)
	1-410, gnl\|Mm7\|chr2 (151244983-151245341)