Non-Coding RNA Search

rssp22_p22.y1

Sequence:


               
               atccaagccacatctgcaacctacaccacagctcacagcaatgctggatccttaacccac
tgagcgaggccagggagcgaacctgtgtcctcatggatgctagtgtgattcattgccact
gagccacaatgggaactccCCAGAAGCTCTTTACCATTTATCCTGCTGGATAAAGTTCAA
GTTCTCCAACCTGACCCACACAGGCTCCTCCCCCTCTCTGGTCGATCAGCCTGCTCCTAG
ATGCTCCAATCACACGGAATTGCTTGTCCTTTCTGCGGGCAGTGTTCTCTCACCTCTGGC
TCTCAAACATAGTGTGTTCTGGAACAGCACCTCCTCCAGGAAGCCTTCCCTAACCACTCC
CATCAATAGTCTCCATTGTCTTTGTCCACTGATTGCTTTGTTTTGTAATTATCTGTTCAT
CTGTTTGTCTCTCCCTTTTCCCACTGACTGTGAACTCTTTGGGGACATGCTCTTATCTTA
GGCAGCTCTGTATATCCAGCCAGCCCTTGATAAAGAAGCAAGCACAAAGCAGATGCACAG
GGAGTTTGCGGAATGAACACATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               atccaagccacatctgcaacctacaccacagctcacagcaatgctggatccttaacccac
tgagcgaggccagggagcgaacctgtgtcctcatggatgctagtgtgattcattgccact
gagccacaatgggaactccCCAGAAGCTCTTTACCATTTATCCTGCTGGATAAAGTTCAA
GTTCTCCAACCTGACCCACACAGGCTCCTCCCCCTCTCTGGTCGATCAGCCTGCTCCTAG
ATGCTCCAATCACACGGAATTGCTTGTCCTTTCTGCGGGCAGTGTTCTCTCACCTCTGGC
TCTCAAACATAGTGTGTTCTGGAACAGCACCTCCTCCAGGAAGCCTTCCCTAACCACTCC
CATCAATAGTCTCCATTGTCTTTGTCCACTGATTGCTTTGTTTTGTAATTATCTGTTCAT
CTGTTTGTCTCTCCCTTTTCCCACTGACTGTGAACTCTTTGGGGACATGCTCTTATCTTA
GGCAGCTCTGTATATCCAGCCAGCCCTTGATAAAGAAGCAAGCACAAAGCAGATGCACAG
GGAGTTTGCGGAATGAACACATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               149-375, gnl|bosTau2|chr19 (17270269-17270495)
               

               
               149-375, gnl|Hg17|chr17 (1481094-1481965)
               

               
               149-375, gnl|Mm7|chr11 (75611444-75611244)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               149-375, gnl|bosTau2|chr19 (17270269-17270495)
               

               
               149-375, gnl|Hg17|chr17 (1481094-1481965)
               

               
               149-375, gnl|Mm7|chr11 (75611444-75611244)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	149-375, gnl\|bosTau2\|chr19 (17270269-17270495)
	149-375, gnl\|Hg17\|chr17 (1481094-1481965)
	149-375, gnl\|Mm7\|chr11 (75611444-75611244)