Non-Coding RNA Search

rssp25_d4.y1

Sequence:


               
               GAAATCAGCTGTGTAGAAATCTGAATACCCTGGGATTCAATTTTTCCGGGTATGCATGCC
ATCAGGGGAGAGATTGCTTTATCTAGGGCGTGGTTATATAACCTATAATCTCCCACCTGA
ATAAAGGATGGATTAAATTCACTCAGGGGAATCCATTGGGGCCATTCCCCTTTCTTCATA
TTTCTAGTTTCTCAGTTCTCCCTCAGCTCAGCCTCCAGCTCAACAGGTTTAGTTTAGTTT
TTTTTTTTTCCCTGCTTTTAGGGTCCGCACCCATGGCATATGGAATTTCAGATTGGAGCG
TAGCTGCTGaccacagctcatggcaatgccggctccttaacccactgagcaaggctgggg
attggaatctgcatcctcatggatgctagtcagattcgataactgctgagccacgatggg
cactccCCAGCTCAATATGTCTTAATAGGACATGGGAAGCAGTTGAACATAATTTTTAGG
CTATTTCACTTAGGAATCATATAATCTGAATTCAAATTTCAGTGCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATCAGCTGTGTAGAAATCTGAATACCCTGGGATTCAATTTTTCCGGGTATGCATGCC
ATCAGGGGAGAGATTGCTTTATCTAGGGCGTGGTTATATAACCTATAATCTCCCACCTGA
ATAAAGGATGGATTAAATTCACTCAGGGGAATCCATTGGGGCCATTCCCCTTTCTTCATA
TTTCTAGTTTCTCAGTTCTCCCTCAGCTCAGCCTCCAGCTCAACAGGTTTAGTTTAGTTT
TTTTTTTTTCCCTGCTTTTAGGGTCCGCACCCATGGCATATGGAATTTCAGATTGGAGCG
TAGCTGCTGaccacagctcatggcaatgccggctccttaacccactgagcaaggctgggg
attggaatctgcatcctcatggatgctagtcagattcgataactgctgagccacgatggg
cactccCCAGCTCAATATGTCTTAATAGGACATGGGAAGCAGTTGAACATAATTTTTAGG
CTATTTCACTTAGGAATCATATAATCTGAATTCAAATTTCAGTGCCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-218, gnl|bosTau2|chr18 (45952870-45953086)
               

               
               1-218, gnl|Hg17|chr19 (46260247-46260465)
               

               
               1-218, gnl|Mm7|chr7 (23706129-23705937)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-218, gnl|bosTau2|chr18 (45952870-45953086)
               

               
               1-218, gnl|Hg17|chr19 (46260247-46260465)
               

               
               1-218, gnl|Mm7|chr7 (23706129-23705937)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	1-218, gnl\|bosTau2\|chr18 (45952870-45953086)
	1-218, gnl\|Hg17\|chr19 (46260247-46260465)
	1-218, gnl\|Mm7\|chr7 (23706129-23705937)