Non-Coding RNA Search

rssp35_e18.y1

Sequence:


               
               CCGCAGGACTGAATGGAGTGGCTGGAGGGAGTTCCCGCTGTGAAAAAGCCTGTAACCCTC
AGATGGGCAATTTGGCTTTAGTGGAGAAAACTCTGGGCAGACACCACCTGTGGTCAGAAC
GCCACTGAACTGTACTGCTTCTACAGTGAGAACACTGATCTGACTTGTCAGCAGCCCAAA
TGTGACAAATGCAATGCTGACCAGCCTCACCTGGCTCACCTGCCAGCTGCCATGGCAGAC
TCATCCTTCAGGTTTCCTCGCACGTGGTGGCAGTCTGCTGAGGATGTGCACAGAGAAAAG
ATCCAGTTGGACTTGGAAGCTGAATTCTACTTCACTCATCTAATCATGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCAGGACTGAATGGAGTGGCTGGAGGGAGTTCCCGCTGTGAAAAAGCCTGTAACCCTC
AGATGGGCAATTTGGCTTTAGTGGAGAAAACTCTGGGCAGACACCACCTGTGGTCAGAAC
GCCACTGAACTGTACTGCTTCTACAGTGAGAACACTGATCTGACTTGTCAGCAGCCCAAA
TGTGACAAATGCAATGCTGACCAGCCTCACCTGGCTCACCTGCCAGCTGCCATGGCAGAC
TCATCCTTCAGGTTTCCTCGCACGTGGTGGCAGTCTGCTGAGGATGTGCACAGAGAAAAG
ATCCAGTTGGACTTGGAAGCTGAATTCTACTTCACTCATCTAATCATGGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61827901|ref|XP_606692.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61827901|ref|XP_606692.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-351, gnl|bosTau2|chr5 (35846484-35846829)
               

               
               5-351, gnl|Hg17|chr12 (94683716-94683371)
               

               
               5-351, gnl|Mm7|chr10 (93203374-93203719)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-351, gnl|bosTau2|chr5 (35846484-35846829)
               

               
               5-351, gnl|Hg17|chr12 (94683716-94683371)
               

               
               5-351, gnl|Mm7|chr10 (93203374-93203719)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	5-351, gnl\|bosTau2\|chr5 (35846484-35846829)
	5-351, gnl\|Hg17\|chr12 (94683716-94683371)
	5-351, gnl\|Mm7\|chr10 (93203374-93203719)