Non-Coding RNA Search

rste17_c18.y1

Sequence:


               
               ATGGATTGCAGGCTGCTCCCCTCCCACCACAGTCTCAGCTGGGAGAGAGCCGGTGAGCCC
TGAACCAAAGTGATGAGGTAGGGCCCCTCGGACTCAGAACATGGGATCTGGGTCAGACTT
CCTGAGCCCAGATCCAAGCTCAGAAACCACAGTGGTGGGACTTTGGGCAAGGCGCTTTCC
CACTCTGAATTTGGGTTTCTTCATTAGTCGACGGAGATAATAACTGTTCCCACCATGCAG
CTCTCAGGCAGCGTCCTGAAGTCACGTGTGCTCATATTTCAGCACTTGGTAAATGTGAGC
TATGATGATGAACAAACTCTTTCCAAAATTCAGGCATATGGGGATTGCTTTTAACTTTTA
TGAAATTTTGTTAGGGAGCATTGCAAACATGCACAAAGATAGGTAATCATAACCATGAAC
TCCTGTGTGCTCATCACATAGCTTCAACAATGATCAACATTTTGCCAAACGTGGAGTTCC
CATTGCGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGATTGCAGGCTGCTCCCCTCCCACCACAGTCTCAGCTGGGAGAGAGCCGGTGAGCCC
TGAACCAAAGTGATGAGGTAGGGCCCCTCGGACTCAGAACATGGGATCTGGGTCAGACTT
CCTGAGCCCAGATCCAAGCTCAGAAACCACAGTGGTGGGACTTTGGGCAAGGCGCTTTCC
CACTCTGAATTTGGGTTTCTTCATTAGTCGACGGAGATAATAACTGTTCCCACCATGCAG
CTCTCAGGCAGCGTCCTGAAGTCACGTGTGCTCATATTTCAGCACTTGGTAAATGTGAGC
TATGATGATGAACAAACTCTTTCCAAAATTCAGGCATATGGGGATTGCTTTTAACTTTTA
TGAAATTTTGTTAGGGAGCATTGCAAACATGCACAAAGATAGGTAATCATAACCATGAAC
TCCTGTGTGCTCATCACATAGCTTCAACAATGATCAACATTTTGCCAAACGTGGAGTTCC
CATTGCGGCTC

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               121-390, gnl|bosTau2|chr7 (706889-707160)
               

               
               121-390, gnl|canFam2|chr11 (4547073-4546715)
               

               
               121-390, gnl|hg17|chr5 (179493223-179493592)
               

               
               121-390, gnl|Hg17|chr5 (179493666-179493397)
               

               
               121-390, gnl|panTro1|chr4_random (25442108-25441737)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               121-390, gnl|bosTau2|chr7 (706889-707160)
               

               
               121-390, gnl|canFam2|chr11 (4547073-4546715)
               

               
               121-390, gnl|hg17|chr5 (179493223-179493592)
               

               
               121-390, gnl|Hg17|chr5 (179493666-179493397)
               

               
               121-390, gnl|panTro1|chr4_random (25442108-25441737)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	121-390, gnl\|bosTau2\|chr7 (706889-707160)
	121-390, gnl\|canFam2\|chr11 (4547073-4546715)
	121-390, gnl\|hg17\|chr5 (179493223-179493592)
	121-390, gnl\|Hg17\|chr5 (179493666-179493397)
	121-390, gnl\|panTro1\|chr4_random (25442108-25441737)