Non-Coding RNA Search

rste18_g19.y1

Sequence:


               
               GACCAGATGGCCAAGCTGCGAAGCCTCTACTCCAGTGCGGAGAACGAGCCCCCTGTCCCC
CTAGTGAGGAACTGGCGCCCCCCACAGCCTATCAAGGGCAGGATAGTGAAGGCCTCCTTC
AAATGAGGCTGCTGGAGCTTGCCCTCTTCAGGAAAGGAAACCTGCTACTGCAGAGCTTGG
TTCCTTGCCTCCTTTTGGTGCTCCTTATTCCAAGTATTATTTCAGTTTTCCACACTGAGC
AATGAAGGTGAGAGCTGCAATCACCAAGAACCAAAGTTACTATTGACAGATCTAATACGA
AAGCATTTGGCCTTTGTAAGAATCATCTTTCCTGTAAAAGAAAACTCTTACTAAGTTTCA
AAGAAAAAGAAACAGAGATAGAAAAGATGGAGAAAAATGGCTGTTGGGCGCCATTTTGTG
TCATCTTAAATGGGGCACAACTTCAGTTTTTACTCTTTTCATGTTACTAGTTATCGATCT
TAAAGAAATAATGAGTAATTCTATATGAGGAGTAGAGGTATATGAAGATCATGTAGCAAT
TACACATAAGCCAGAAATTAAAATAACTGTGGACGTCAAGAATTGCAATGATGCTGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCAGATGGCCAAGCTGCGAAGCCTCTACTCCAGTGCGGAGAACGAGCCCCCTGTCCCC
CTAGTGAGGAACTGGCGCCCCCCACAGCCTATCAAGGGCAGGATAGTGAAGGCCTCCTTC
AAATGAGGCTGCTGGAGCTTGCCCTCTTCAGGAAAGGAAACCTGCTACTGCAGAGCTTGG
TTCCTTGCCTCCTTTTGGTGCTCCTTATTCCAAGTATTATTTCAGTTTTCCACACTGAGC
AATGAAGGTGAGAGCTGCAATCACCAAGAACCAAAGTTACTATTGACAGATCTAATACGA
AAGCATTTGGCCTTTGTAAGAATCATCTTTCCTGTAAAAGAAAACTCTTACTAAGTTTCA
AAGAAAAAGAAACAGAGATAGAAAAGATGGAGAAAAATGGCTGTTGGGCGCCATTTTGTG
TCATCTTAAATGGGGCACAACTTCAGTTTTTACTCTTTTCATGTTACTAGTTATCGATCT
TAAAGAAATAATGAGTAATTCTATATGAGGAGTAGAGGTATATGAAGATCATGTAGCAAT
TACACATAAGCCAGAAATTAAAATAACTGTGGACGTCAAGAATTGCAATGATGCTGTGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-538, gnl|bosTau2|chr14 (46823497-46824052)
               

               
               4-538, gnl|Hg17|chr8 (86547512-86548084)
               

               
               4-538, gnl|Mm7|chr3 (14893134-14893680)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-538, gnl|bosTau2|chr14 (46823497-46824052)
               

               
               4-538, gnl|Hg17|chr8 (86547512-86548084)
               

               
               4-538, gnl|Mm7|chr3 (14893134-14893680)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	4-538, gnl\|bosTau2\|chr14 (46823497-46824052)
	4-538, gnl\|Hg17\|chr8 (86547512-86548084)
	4-538, gnl\|Mm7\|chr3 (14893134-14893680)