Non-Coding RNA Search

rste27_o19.y1

Sequence:


               
               AGGCACTTGTCGCCTGGAGAAAGTCTGGGACGACCTCTAGAATTAATCTGGCTTAAACCT
CTGTTGTCAAATAAGGTTCCATCTGAAGACTTCCCCAGGATTCAAGCCCTGGGAGACCTG
ACGCAAAATGCCCCCTCAGTATGTAATGGGTTCTTCGACATAACTTCTTAGTGACCTGAG
TACAAATATCTTTTATGGTGAATTTTTCCCTTCAGAATGGGAGAATTTTTTTTCAAGGTC
CTGAGTTTCTTGGATGTTTATACAAACGGTGTTTTCATTACAATACTTATGAAAATCTCA
AAGATTTGTACTTTGAGGTTTATTTATCATAGGATTAATACCAGAGGTGATTGCTGAAGC
CCTCACTGCCTATAAAGTACTTTCCTGGTGATCATTTTACACATGAAATTTTCTTTTGCT
GAAAAACTTGACCATTTGGAGAAGTGTTAGTGTCCTAGTTTTTCCCTTTGGGAAGGAGTG
GGGAGTTGAATGTTGCAGAGACAAAAATTTTCTGCATATCTGTGAGGTAGGCACTCTTTC
TTACACACACTCACCGAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCACTTGTCGCCTGGAGAAAGTCTGGGACGACCTCTAGAATTAATCTGGCTTAAACCT
CTGTTGTCAAATAAGGTTCCATCTGAAGACTTCCCCAGGATTCAAGCCCTGGGAGACCTG
ACGCAAAATGCCCCCTCAGTATGTAATGGGTTCTTCGACATAACTTCTTAGTGACCTGAG
TACAAATATCTTTTATGGTGAATTTTTCCCTTCAGAATGGGAGAATTTTTTTTCAAGGTC
CTGAGTTTCTTGGATGTTTATACAAACGGTGTTTTCATTACAATACTTATGAAAATCTCA
AAGATTTGTACTTTGAGGTTTATTTATCATAGGATTAATACCAGAGGTGATTGCTGAAGC
CCTCACTGCCTATAAAGTACTTTCCTGGTGATCATTTTACACATGAAATTTTCTTTTGCT
GAAAAACTTGACCATTTGGAGAAGTGTTAGTGTCCTAGTTTTTCCCTTTGGGAAGGAGTG
GGGAGTTGAATGTTGCAGAGACAAAAATTTTCTGCATATCTGTGAGGTAGGCACTCTTTC
TTACACACACTCACCGAATTC

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               41-207, gnl|bosTau2|chr12 (8256162-8256330)
               

               
               41-207, gnl|Hg17|chr13 (49409766-49409955)
               

               
               41-207, gnl|Mm7|chr14 (56425087-56425279)
               


               
               305-540, gnl|bosTau2|chr12 (8256506-8256749)
               

               
               305-540, gnl|Hg17|chr13 (49410014-49410295)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-207, gnl|bosTau2|chr12 (8256162-8256330)
               

               
               41-207, gnl|Hg17|chr13 (49409766-49409955)
               

               
               41-207, gnl|Mm7|chr14 (56425087-56425279)
               


               
               305-540, gnl|bosTau2|chr12 (8256506-8256749)
               

               
               305-540, gnl|Hg17|chr13 (49410014-49410295)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	41-207, gnl\|bosTau2\|chr12 (8256162-8256330)
	41-207, gnl\|Hg17\|chr13 (49409766-49409955)
	41-207, gnl\|Mm7\|chr14 (56425087-56425279)

	305-540, gnl\|bosTau2\|chr12 (8256506-8256749)
	305-540, gnl\|Hg17\|chr13 (49410014-49410295)