Non-Coding RNA Search

rste28_b13.y1

Sequence:


               
               GGGCCATAGTTACAAATAATGGTCATGAGAAAGAACACACTGTATTTTTTTGTGTGAAAG
CCCTATAGCTTAGGGCTAATTACTGGCTCGGGAACCTGCCTAGTATAGAGAATGAATCTC
AAGTACAAGGTTTTTTAGTGCTTTTTTCCCCTGTATGTTCTGAATGTAGGAACAAATGTT
CTTGGGGATGGAGGTTTTCATCCAAGCCTCATTTGGGGGCCACAAATGATAAGTCAAGCT
AAAACTGCGAGGATTAAAACAGCCAGTGTGGGTATTTTGAGCACAGCCTCTGGAAGCAGC
CTGCCTGGGTGCAAACCTAGCTCCACAAGTCATTCATTTCATGGTCGTTAAGCAAATTGC
TTTTACTTGTGCCTCTTTAGATGCACAATCTATGAAACGGGCATAATAATATTACCTGTA
CCAGAGGGCTGCTATGAGGACTAAACAAGCTCTCTCTAAAACACTGAAAACACTGGATGT
TCTAAGTGGAACATACCTGGAAAATGTATGGTGATCCAGACATGGTCTGAAGACTGAAGC
GAAAGCACTTGATATCACAATCTCTGCATATCCTTAGAGAATTATTTTAGGATGTCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCCATAGTTACAAATAATGGTCATGAGAAAGAACACACTGTATTTTTTTGTGTGAAAG
CCCTATAGCTTAGGGCTAATTACTGGCTCGGGAACCTGCCTAGTATAGAGAATGAATCTC
AAGTACAAGGTTTTTTAGTGCTTTTTTCCCCTGTATGTTCTGAATGTAGGAACAAATGTT
CTTGGGGATGGAGGTTTTCATCCAAGCCTCATTTGGGGGCCACAAATGATAAGTCAAGCT
AAAACTGCGAGGATTAAAACAGCCAGTGTGGGTATTTTGAGCACAGCCTCTGGAAGCAGC
CTGCCTGGGTGCAAACCTAGCTCCACAAGTCATTCATTTCATGGTCGTTAAGCAAATTGC
TTTTACTTGTGCCTCTTTAGATGCACAATCTATGAAACGGGCATAATAATATTACCTGTA
CCAGAGGGCTGCTATGAGGACTAAACAAGCTCTCTCTAAAACACTGAAAACACTGGATGT
TCTAAGTGGAACATACCTGGAAAATGTATGGTGATCCAGACATGGTCTGAAGACTGAAGC
GAAAGCACTTGATATCACAATCTCTGCATATCCTTAGAGAATTATTTTAGGATGTCTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-599, gnl|bosTau2|chr6 (8404433-8405026)
               

               
               2-599, gnl|Hg17|chr4 (104328400-104327795)
               

               
               2-599, gnl|Mm7|chr3 (135118318-135118839)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-599, gnl|bosTau2|chr6 (8404433-8405026)
               

               
               2-599, gnl|Hg17|chr4 (104328400-104327795)
               

               
               2-599, gnl|Mm7|chr3 (135118318-135118839)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	2-599, gnl\|bosTau2\|chr6 (8404433-8405026)
	2-599, gnl\|Hg17\|chr4 (104328400-104327795)
	2-599, gnl\|Mm7\|chr3 (135118318-135118839)