Non-Coding RNA Search

rste34_f21.y1

Sequence:


               
               GGtaactatggtggtggtgggaactataatgattttggaaattatagtggacaacaacaa
tcaaattatggacccatgaaggggggcagttttggtggaagaagctcgggcagtccctat
ggtggtggttatggatctggtggtggaagtggtggatatggtagcagaagGTTCTAAAAA
CTCAGCAGAAAAGGGTAGGTATCTTTAAATTTTTATTATGATGATAAAGAATATGTGGAA
CTGTTCACTGAGTGTAATAATTTTTTTATCCTGTATTATTCAACAGGCtacagttcttag
caggagagagagcgaggagttgtcaggaaagctgcaggttactttgagacagtcgtccca
aatgcattagaggaactgtaaaaatctgccacagaaggaacgatgatccatagtcagaaa
agttactgcagcttaaacaggaaacccttcttgttcaggactgtcatagccacagtttgc
aaaaagtgcagctattgattaatgcaatgtagtgtcaattagatgtacattcctgaggtc
ttttA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGtaactatggtggtggtgggaactataatgattttggaaattatagtggacaacaacaa
tcaaattatggacccatgaaggggggcagttttggtggaagaagctcgggcagtccctat
ggtggtggttatggatctggtggtggaagtggtggatatggtagcagaagGTTCTAAAAA
CTCAGCAGAAAAGGGTAGGTATCTTTAAATTTTTATTATGATGATAAAGAATATGTGGAA
CTGTTCACTGAGTGTAATAATTTTTTTATCCTGTATTATTCAACAGGCtacagttcttag
caggagagagagcgaggagttgtcaggaaagctgcaggttactttgagacagtcgtccca
aatgcattagaggaactgtaaaaatctgccacagaaggaacgatgatccatagtcagaaa
agttactgcagcttaaacaggaaacccttcttgttcaggactgtcatagccacagtttgc
aaaaagtgcagctattgattaatgcaatgtagtgtcaattagatgtacattcctgaggtc
ttttA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-195, gnl|bosTau2|chr23 (567762-567569)
               

               
               1-195, gnl|Hg17|chr1 (113705218-113705413)
               

               
               1-195, gnl|Mm7|chr15 (77785824-77786015)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-195, gnl|bosTau2|chr23 (567762-567569)
               

               
               1-195, gnl|Hg17|chr1 (113705218-113705413)
               

               
               1-195, gnl|Mm7|chr15 (77785824-77786015)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	1-195, gnl\|bosTau2\|chr23 (567762-567569)
	1-195, gnl\|Hg17\|chr1 (113705218-113705413)
	1-195, gnl\|Mm7\|chr15 (77785824-77786015)