Non-Coding RNA Search

rsto219_m7.y1

Sequence:


               
               CGGTCCTGCAGCAGCCTCCTTCGCCCGCGGGAGATGTCAGGTCAGCTCTCCCGTCCCCGA
GCCGCTACCCGGTCTTTGGTCAGGAAAAAGCAGATCCTCCTCAGGTCCCACGCTCCCGAT
TTCCACTCTAGGGGGACCCTTCCCAGCGACCATTCCCCTATCATTTCTCCTCAGCTGTAG
AAAGAGCAGCCCTCCTTTCCCTTCAGAAAGGGAGCCGTATTTCCCTTCCGACTTCCCCTC
CACCGGGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTCCTGCAGCAGCCTCCTTCGCCCGCGGGAGATGTCAGGTCAGCTCTCCCGTCCCCGA
GCCGCTACCCGGTCTTTGGTCAGGAAAAAGCAGATCCTCCTCAGGTCCCACGCTCCCGAT
TTCCACTCTAGGGGGACCCTTCCCAGCGACCATTCCCCTATCATTTCTCCTCAGCTGTAG
AAAGAGCAGCCCTCCTTTCCCTTCAGAAAGGGAGCCGTATTTCCCTTCCGACTTCCCCTC
CACCGGGGCC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               2-242, gnl|bosTau2|chr15 (14821179-14821418)
               

               
               2-242, gnl|canFam2|chr5 (18008641-18008062)
               

               
               2-242, gnl|dasNov1|scaffold_1747 (55289-55857)
               

               
               2-242, gnl|hg17|chr11 (118166906-118167464)
               

               
               2-242, gnl|Hg17|chr11 (118167577-118167315)
               

               
               2-242, gnl|loxAfr1|scaffold_27873 (19756-20381)
               

               
               2-242, gnl|mm7|chr9 (44539199-44538646)
               

               
               2-242, gnl|monDom2|scaffold_2 (119917790-119917183)
               

               
               2-242, gnl|panTro1|chr9 (120183706-120184267)
               

               
               2-242, gnl|rheMac2|chr14 (117188848-117189406)
               

               
               2-242, gnl|rn3|chr8 (47582259-47581734)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-242, gnl|bosTau2|chr15 (14821179-14821418)
               

               
               2-242, gnl|canFam2|chr5 (18008641-18008062)
               

               
               2-242, gnl|dasNov1|scaffold_1747 (55289-55857)
               

               
               2-242, gnl|hg17|chr11 (118166906-118167464)
               

               
               2-242, gnl|Hg17|chr11 (118167577-118167315)
               

               
               2-242, gnl|loxAfr1|scaffold_27873 (19756-20381)
               

               
               2-242, gnl|mm7|chr9 (44539199-44538646)
               

               
               2-242, gnl|monDom2|scaffold_2 (119917790-119917183)
               

               
               2-242, gnl|panTro1|chr9 (120183706-120184267)
               

               
               2-242, gnl|rheMac2|chr14 (117188848-117189406)
               

               
               2-242, gnl|rn3|chr8 (47582259-47581734)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sto (0.179824)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)

	2-242, gnl\|bosTau2\|chr15 (14821179-14821418)
	2-242, gnl\|canFam2\|chr5 (18008641-18008062)
	2-242, gnl\|dasNov1\|scaffold_1747 (55289-55857)
	2-242, gnl\|hg17\|chr11 (118166906-118167464)
	2-242, gnl\|Hg17\|chr11 (118167577-118167315)
	2-242, gnl\|loxAfr1\|scaffold_27873 (19756-20381)
	2-242, gnl\|mm7\|chr9 (44539199-44538646)
	2-242, gnl\|monDom2\|scaffold_2 (119917790-119917183)
	2-242, gnl\|panTro1\|chr9 (120183706-120184267)
	2-242, gnl\|rheMac2\|chr14 (117188848-117189406)
	2-242, gnl\|rn3\|chr8 (47582259-47581734)