Non-Coding RNA Search

rsug07_e14.y1

Sequence:


               
               ACTTGTCTAGCAGCATGCTACAAAAGCGAAACTATGAGAATTTTATTGGGAACGCACATT
ATCGACCAAATGACAAAAAAACTTGATTTCCTGTTTTGGGGACAAAAGGTCTTGATGGAT
GTAAGTGTGTACTCTCCACGGAATCAAATCAGTTCATCCTTTGAAAAAGCAACTGGTGAA
AGCTACTGAAATAAGCTGTGATTGTACTGTACATACAACATACAAGGAACACTACGGTTT
TGTAAAGTTGTTCTGTTAACTTTTGTACCAAATAGCAATAAAAACTAGTTGGAACAGCTG
GGTTGTACACAAATGGAGACCGGACATCTCTATTTTGTCCTGAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTGTCTAGCAGCATGCTACAAAAGCGAAACTATGAGAATTTTATTGGGAACGCACATT
ATCGACCAAATGACAAAAAAACTTGATTTCCTGTTTTGGGGACAAAAGGTCTTGATGGAT
GTAAGTGTGTACTCTCCACGGAATCAAATCAGTTCATCCTTTGAAAAAGCAACTGGTGAA
AGCTACTGAAATAAGCTGTGATTGTACTGTACATACAACATACAAGGAACACTACGGTTT
TGTAAAGTTGTTCTGTTAACTTTTGTACCAAATAGCAATAAAAACTAGTTGGAACAGCTG
GGTTGTACACAAATGGAGACCGGACATCTCTATTTTGTCCTGAATA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               107-346, gnl|bosTau2|chr13 (62185344-62185108)
               

               
               107-346, gnl|canFam2|chr24 (42394535-42394803)
               

               
               107-346, gnl|dasNov1|scaffold_74469 (3118-3385)
               

               
               107-346, gnl|echTel1|scaffold_197135 (2953-3232)
               

               
               107-346, gnl|galGal2|chr20 (12081119-12080850)
               

               
               107-346, gnl|hg17|chr20 (51618912-51619189)
               

               
               107-346, gnl|Hg17|chr20 (51619212-51618960)
               

               
               107-346, gnl|mm7|chr2 (169903028-169903290)
               

               
               107-346, gnl|Mm7|chr2 (169903311-169903077)
               

               
               107-346, gnl|monDom2|scaffold_1 (165785113-165785374)
               

               
               107-346, gnl|oryCun1|scaffold_213846 (40866-41126)
               

               
               107-346, gnl|panTro1|chr21 (54395890-54396169)
               

               
               107-346, gnl|rheMac2|chr10 (10904459-10904182)
               

               
               107-346, gnl|rn3|chr3 (161056434-161056689)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-346, gnl|bosTau2|chr13 (62185344-62185108)
               

               
               107-346, gnl|canFam2|chr24 (42394535-42394803)
               

               
               107-346, gnl|dasNov1|scaffold_74469 (3118-3385)
               

               
               107-346, gnl|echTel1|scaffold_197135 (2953-3232)
               

               
               107-346, gnl|galGal2|chr20 (12081119-12080850)
               

               
               107-346, gnl|hg17|chr20 (51618912-51619189)
               

               
               107-346, gnl|Hg17|chr20 (51619212-51618960)
               

               
               107-346, gnl|mm7|chr2 (169903028-169903290)
               

               
               107-346, gnl|Mm7|chr2 (169903311-169903077)
               

               
               107-346, gnl|monDom2|scaffold_1 (165785113-165785374)
               

               
               107-346, gnl|oryCun1|scaffold_213846 (40866-41126)
               

               
               107-346, gnl|panTro1|chr21 (54395890-54396169)
               

               
               107-346, gnl|rheMac2|chr10 (10904459-10904182)
               

               
               107-346, gnl|rn3|chr3 (161056434-161056689)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sug (0.127291)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.127291)

	107-346, gnl\|bosTau2\|chr13 (62185344-62185108)
	107-346, gnl\|canFam2\|chr24 (42394535-42394803)
	107-346, gnl\|dasNov1\|scaffold_74469 (3118-3385)
	107-346, gnl\|echTel1\|scaffold_197135 (2953-3232)
	107-346, gnl\|galGal2\|chr20 (12081119-12080850)
	107-346, gnl\|hg17\|chr20 (51618912-51619189)
	107-346, gnl\|Hg17\|chr20 (51619212-51618960)
	107-346, gnl\|mm7\|chr2 (169903028-169903290)
	107-346, gnl\|Mm7\|chr2 (169903311-169903077)
	107-346, gnl\|monDom2\|scaffold_1 (165785113-165785374)
	107-346, gnl\|oryCun1\|scaffold_213846 (40866-41126)
	107-346, gnl\|panTro1\|chr21 (54395890-54396169)
	107-346, gnl\|rheMac2\|chr10 (10904459-10904182)
	107-346, gnl\|rn3\|chr3 (161056434-161056689)