Non-Coding RNA Search

rsug11_k23.y1

Sequence:


               
               ACCCACACCCCCCACAAAAAAACTTGACTTTACATGCGCTTTTAATGACAAAAACTCAAA
TGGCACCAGCCCAACATATAGGCGCAACTCTACAACAACAAACCAGTGTGAATGTATGAT
GGAGAGGATCTTTGAAAGGGAAAGATTTAAGTTTCAAGCTTTTAATGGGTTATTGTAAAC
AGTGAGGAAAATGATTTGAAAAATTATGAAAAAAAATACCTTGACAGTGTCCTTTTAACC
AGTGCAGCAGAGAGAGAAATAAACTGTAAATAACAGCCCAACAGCCATGTCAAGTTTAGT
TTTGTATGACAGCAGTAAAATCAAGGCTTTAAACACACAGCATGACAGAAGCATTCTGTT
AGCTCAGAAGCTGCAACCACTAGAGAAATAAGGAACAGACTGTACAGAGACTAAAATGGG
AAAGTCAAGGCACAGAAATGAGCAAAACAAAGGCAGTTTGGGGGGCAGGGTCTGTGGAGT
GTTAAAGGGAGATGGTGTCAGAAAAGCAGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCACACCCCCCACAAAAAAACTTGACTTTACATGCGCTTTTAATGACAAAAACTCAAA
TGGCACCAGCCCAACATATAGGCGCAACTCTACAACAACAAACCAGTGTGAATGTATGAT
GGAGAGGATCTTTGAAAGGGAAAGATTTAAGTTTCAAGCTTTTAATGGGTTATTGTAAAC
AGTGAGGAAAATGATTTGAAAAATTATGAAAAAAAATACCTTGACAGTGTCCTTTTAACC
AGTGCAGCAGAGAGAGAAATAAACTGTAAATAACAGCCCAACAGCCATGTCAAGTTTAGT
TTTGTATGACAGCAGTAAAATCAAGGCTTTAAACACACAGCATGACAGAAGCATTCTGTT
AGCTCAGAAGCTGCAACCACTAGAGAAATAAGGAACAGACTGTACAGAGACTAAAATGGG
AAAGTCAAGGCACAGAAATGAGCAAAACAAAGGCAGTTTGGGGGGCAGGGTCTGTGGAGT
GTTAAAGGGAGATGGTGTCAGAAAAGCAGAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-512, gnl|bosTau2|chr2 (83153375-83153877)
               

               
               9-512, gnl|Hg17|chr1 (23138082-23137586)
               

               
               9-512, gnl|Mm7|chr4 (135941651-135942159)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-512, gnl|bosTau2|chr2 (83153375-83153877)
               

               
               9-512, gnl|Hg17|chr1 (23138082-23137586)
               

               
               9-512, gnl|Mm7|chr4 (135941651-135942159)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sug (0.127291)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.127291)

	9-512, gnl\|bosTau2\|chr2 (83153375-83153877)
	9-512, gnl\|Hg17\|chr1 (23138082-23137586)
	9-512, gnl\|Mm7\|chr4 (135941651-135942159)