rsug20_c22.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACGGAGGGCAGTACTGCAGGTCTTTCCTTGCGGCGGCTTGAGAGCAGGCTAGCAGTTG CGGTGGCCGGGGTCATGGCACGGACAAGCATTTAGAAAGTTTCTTCCTCTCTTTGATCGA GTATTAGTTGAAAGAAGTGCAGCTGAAACGGTAACCAAAGGAGGCATTATGCTTCCAGAA AAATCTCAAGGAAAAGTATTGCAAGCAACCGTAGTAGCTGTTGGATCAGGCTCTAAAGGA AAGGGTGGAGAGATTCAACCAGTTAGTGTCAAAGTTGGAGATAAAGTTCTTCTGCCAGAA TATGGAGGCACCAGAGTAGTTCTGGATGACAAGGATTATTTCTTATTTAGAGATGGTGAC ATTCTTGGAAAATACGTAGACTGAAACAAGTCACTGTCTAATGGCATCACATGAAGCTGC CCCCATTCCACTGAAGTTCTGAGATCTTTTCATCATGTAAATAATTTCAATGTCTGTCTT TTATAATAAACTAATGATATCCAAACTGATGACATCCAGTGCTTCTAAAATTTAGTTTCA CTGTACCGATGTACACATTTACAAATAAAAATATATAAATGAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACGGAGGGCAGTACTGCAGGTCTTTCCTTGCGGCGGCTTGAGAGCAGGCTAGCAGTTG CGGTGGCCGGGGTCATGGCACGGACAAGCATTTAGAAAGTTTCTTCCTCTCTTTGATCGA GTATTAGTTGAAAGAAGTGCAGCTGAAACGGTAACCAAAGGAGGCATTATGCTTCCAGAA AAATCTCAAGGAAAAGTATTGCAAGCAACCGTAGTAGCTGTTGGATCAGGCTCTAAAGGA AAGGGTGGAGAGATTCAACCAGTTAGTGTCAAAGTTGGAGATAAAGTTCTTCTGCCAGAA TATGGAGGCACCAGAGTAGTTCTGGATGACAAGGATTATTTCTTATTTAGAGATGGTGAC ATTCTTGGAAAATACGTAGACTGAAACAAGTCACTGTCTAATGGCATCACATGAAGCTGC CCCCATTCCACTGAAGTTCTGAGATCTTTTCATCATGTAAATAATTTCAATGTCTGTCTT TTATAATAAACTAATGATATCCAAACTGATGACATCCAGTGCTTCTAAAATTTAGTTTCA CTGTACCGATGTACACATTTACAAATAAAAATATATAAATGAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 89 entry(ies) | More info |
| Aligned organism(s): 89 entry(ies) | Help | Less info |
| 62-371, gnl|bosTau2|chr26 (26080815-26081122) | |
| 62-371, gnl|Hg17|chr2 (235146440-235146136) | |
| 62-371, gnl|Mm7|chr18 (47489657-47489956) | |
| 77-244, gnl|bosTau2|chr19 (28770558-28770724) | |
| 77-244, gnl|canFam2|chr6 (32927905-32928014) | |
| 77-244, gnl|canFam2|chr6 (32927905-32928014) | |
| 77-244, gnl|canFam2|chr8 (38807900-38808017) | |
| 77-244, gnl|canFam2|chr8 (38807888-38808014) | |
| 77-244, gnl|canFam2|chr8 (38807897-38808011) | |
| 77-244, gnl|dasNov1|scaffold_117556 (3958-4075) | |
| 77-244, gnl|dasNov1|scaffold_117556 (3966-4075) | |
| 77-244, gnl|dasNov1|scaffold_204976 (859-752) | |
| 77-244, gnl|dasNov1|scaffold_31094 (16750-16870) | |
| 77-244, gnl|dasNov1|scaffold_31094 (16753-16867) | |
| 77-244, gnl|dasNov1|scaffold_39635 (14740-14849) | |
| 77-244, gnl|echTel1|scaffold_265248 (6316-6207) | |
| 77-244, gnl|echTel1|scaffold_316113 (78577-78692) | |
| 77-244, gnl|echTel1|scaffold_316113 (78577-78702) | |
| 77-244, gnl|echTel1|scaffold_316113 (78585-78692) | |
| 77-244, gnl|echTel1|scaffold_316113 (78572-78686) | |
| 77-244, gnl|echTel1|scaffold_316113 (78585-78692) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|fr1|chrUn (190958078-190957992) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|galGal2|chr2 (21697528-21697419) | |
| 77-244, gnl|galGal2|chr2 (21697528-21697419) | |
| 77-244, gnl|hg17|chr1 (10890062-10890191) | |
| 77-244, gnl|hg17|chr12 (10814176-10814285) | |
| 77-244, gnl|hg17|chr14 (63137975-63138089) | |
| 77-244, gnl|Hg17|chr2 (198191303-198191469) | |
| 77-244, gnl|hg17|chr4 (76200203-76200317) | |
| 77-244, gnl|hg17|chr6 (35099278-35099387) | |
| 77-244, gnl|hg17|chr9 (91869338-91869467) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5788-5904) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5776-5914) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5795-5904) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5795-5904) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5784-5898) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5795-5904) | |
| 77-244, gnl|Mm7|chr1 (55336360-55336526) | |
| 77-244, gnl|mm7|chr18 (47489662-47489779) | |
| 77-244, gnl|mm7|chr18 (47489658-47489776) | |
| 77-244, gnl|mm7|chr18 (47489670-47489779) | |
| 77-244, gnl|mm7|chr18 (47489670-47489779) | |
| 77-244, gnl|mm7|chr18 (47489659-47489773) | |
| 77-244, gnl|mm7|chr18 (47489670-47489779) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239181) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|oryCun1|scaffold_123638 (7792-7675) | |
| 77-244, gnl|oryCun1|scaffold_123638 (7784-7675) | |
| 77-244, gnl|oryCun1|scaffold_123638 (7795-7681) | |
| 77-244, gnl|oryCun1|scaffold_140603 (1714-1605) | |
| 77-244, gnl|oryCun1|scaffold_214698 (106232-106102) | |
| 77-244, gnl|oryCun1|scaffold_214698 (106208-106099) | |
| 77-244, gnl|panTro1|chr1 (11094014-11094143) | |
| 77-244, gnl|panTro1|chr11 (76040784-76040914) | |
| 77-244, gnl|panTro1|chr15 (62697879-62697993) | |
| 77-244, gnl|panTro1|chr3 (57555414-57555300) | |
| 77-244, gnl|panTro1|chr5 (35555755-35555864) | |
| 77-244, gnl|panTro1|chrUn_random (37099616-37099725) | |
| 77-244, gnl|rheMac2|chr1 (13992969-13993096) | |
| 77-244, gnl|rheMac2|chr11 (10925230-10925339) | |
| 77-244, gnl|rheMac2|chr15 (23828901-23829005) | |
| 77-244, gnl|rheMac2|chr15 (103838934-103839061) | |
| 77-244, gnl|rheMac2|chr4 (34737880-34737985) | |
| 77-244, gnl|rheMac2|chr5 (54644672-54644557) | |
| 77-244, gnl|rn3|chr10 (72152702-72152819) | |
| 77-244, gnl|rn3|chr10 (72152697-72152816) | |
| 77-244, gnl|rn3|chr10 (72152710-72152819) | |
| 77-244, gnl|rn3|chr10 (72152710-72152819) | |
| 77-244, gnl|rn3|chr10 (72152701-72152814) | |
| 77-244, gnl|rn3|chr10 (72152710-72152819) | |
| 77-244, gnl|tetNig1|chr2 (6903265-6903163) | |
| 77-244, gnl|tetNig1|chr2 (6903265-6903163) | |
| 77-244, gnl|tetNig1|chr2 (6903262-6903163) | |
| 77-244, gnl|tetNig1|chr2 (6903258-6903169) | |
| 77-244, gnl|tetNig1|chr2 (6903262-6903163) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208089-2207980) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208089-2207980) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208089-2207980) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208095-2207986) | |
| 384-590, gnl|bosTau2|chr12 (20624991-20624789) | |
| 384-590, gnl|Hg17|chr12 (100769562-100769374) | |
| 384-590, gnl|Mm7|chr18 (47489970-47490165) |
| Aligned organism(s): 89 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 62-371, gnl|bosTau2|chr26 (26080815-26081122) | |
| 62-371, gnl|Hg17|chr2 (235146440-235146136) | |
| 62-371, gnl|Mm7|chr18 (47489657-47489956) | |
| 77-244, gnl|bosTau2|chr19 (28770558-28770724) | |
| 77-244, gnl|canFam2|chr6 (32927905-32928014) | |
| 77-244, gnl|canFam2|chr6 (32927905-32928014) | |
| 77-244, gnl|canFam2|chr8 (38807900-38808017) | |
| 77-244, gnl|canFam2|chr8 (38807888-38808014) | |
| 77-244, gnl|canFam2|chr8 (38807897-38808011) | |
| 77-244, gnl|dasNov1|scaffold_117556 (3958-4075) | |
| 77-244, gnl|dasNov1|scaffold_117556 (3966-4075) | |
| 77-244, gnl|dasNov1|scaffold_204976 (859-752) | |
| 77-244, gnl|dasNov1|scaffold_31094 (16750-16870) | |
| 77-244, gnl|dasNov1|scaffold_31094 (16753-16867) | |
| 77-244, gnl|dasNov1|scaffold_39635 (14740-14849) | |
| 77-244, gnl|echTel1|scaffold_265248 (6316-6207) | |
| 77-244, gnl|echTel1|scaffold_316113 (78577-78692) | |
| 77-244, gnl|echTel1|scaffold_316113 (78577-78702) | |
| 77-244, gnl|echTel1|scaffold_316113 (78585-78692) | |
| 77-244, gnl|echTel1|scaffold_316113 (78572-78686) | |
| 77-244, gnl|echTel1|scaffold_316113 (78585-78692) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|fr1|chrUn (190958078-190957992) | |
| 77-244, gnl|fr1|chrUn (190958089-190957986) | |
| 77-244, gnl|galGal2|chr2 (21697528-21697419) | |
| 77-244, gnl|galGal2|chr2 (21697528-21697419) | |
| 77-244, gnl|hg17|chr1 (10890062-10890191) | |
| 77-244, gnl|hg17|chr12 (10814176-10814285) | |
| 77-244, gnl|hg17|chr14 (63137975-63138089) | |
| 77-244, gnl|Hg17|chr2 (198191303-198191469) | |
| 77-244, gnl|hg17|chr4 (76200203-76200317) | |
| 77-244, gnl|hg17|chr6 (35099278-35099387) | |
| 77-244, gnl|hg17|chr9 (91869338-91869467) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5788-5904) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5776-5914) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5795-5904) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5795-5904) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5784-5898) | |
| 77-244, gnl|loxAfr1|scaffold_41758 (5795-5904) | |
| 77-244, gnl|Mm7|chr1 (55336360-55336526) | |
| 77-244, gnl|mm7|chr18 (47489662-47489779) | |
| 77-244, gnl|mm7|chr18 (47489658-47489776) | |
| 77-244, gnl|mm7|chr18 (47489670-47489779) | |
| 77-244, gnl|mm7|chr18 (47489670-47489779) | |
| 77-244, gnl|mm7|chr18 (47489659-47489773) | |
| 77-244, gnl|mm7|chr18 (47489670-47489779) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239181) | |
| 77-244, gnl|monDom2|scaffold_2 (107239078-107239187) | |
| 77-244, gnl|oryCun1|scaffold_123638 (7792-7675) | |
| 77-244, gnl|oryCun1|scaffold_123638 (7784-7675) | |
| 77-244, gnl|oryCun1|scaffold_123638 (7795-7681) | |
| 77-244, gnl|oryCun1|scaffold_140603 (1714-1605) | |
| 77-244, gnl|oryCun1|scaffold_214698 (106232-106102) | |
| 77-244, gnl|oryCun1|scaffold_214698 (106208-106099) | |
| 77-244, gnl|panTro1|chr1 (11094014-11094143) | |
| 77-244, gnl|panTro1|chr11 (76040784-76040914) | |
| 77-244, gnl|panTro1|chr15 (62697879-62697993) | |
| 77-244, gnl|panTro1|chr3 (57555414-57555300) | |
| 77-244, gnl|panTro1|chr5 (35555755-35555864) | |
| 77-244, gnl|panTro1|chrUn_random (37099616-37099725) | |
| 77-244, gnl|rheMac2|chr1 (13992969-13993096) | |
| 77-244, gnl|rheMac2|chr11 (10925230-10925339) | |
| 77-244, gnl|rheMac2|chr15 (23828901-23829005) | |
| 77-244, gnl|rheMac2|chr15 (103838934-103839061) | |
| 77-244, gnl|rheMac2|chr4 (34737880-34737985) | |
| 77-244, gnl|rheMac2|chr5 (54644672-54644557) | |
| 77-244, gnl|rn3|chr10 (72152702-72152819) | |
| 77-244, gnl|rn3|chr10 (72152697-72152816) | |
| 77-244, gnl|rn3|chr10 (72152710-72152819) | |
| 77-244, gnl|rn3|chr10 (72152710-72152819) | |
| 77-244, gnl|rn3|chr10 (72152701-72152814) | |
| 77-244, gnl|rn3|chr10 (72152710-72152819) | |
| 77-244, gnl|tetNig1|chr2 (6903265-6903163) | |
| 77-244, gnl|tetNig1|chr2 (6903265-6903163) | |
| 77-244, gnl|tetNig1|chr2 (6903262-6903163) | |
| 77-244, gnl|tetNig1|chr2 (6903258-6903169) | |
| 77-244, gnl|tetNig1|chr2 (6903262-6903163) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208089-2207980) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208089-2207980) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208089-2207980) | |
| 77-244, gnl|xenTro1|scaffold_48 (2208095-2207986) | |
| 384-590, gnl|bosTau2|chr12 (20624991-20624789) | |
| 384-590, gnl|Hg17|chr12 (100769562-100769374) | |
| 384-590, gnl|Mm7|chr18 (47489970-47490165) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.127291) |