Non-Coding RNA Search

rtes02_e8.y1

Sequence:


               
               AGTGTATGAAAATTTAAATATCACTAATAGCATAGATGAGTTCATGCAAGATAAGCCCTA
TGGACAGAAAAATACAAATAGAAAAGGAAAATCAGTGGCTTTTTCACCAAAAGAATATAT
TTCACCATCTTTCAGTCCAGAATATATAGAATTCAAACCAAACTATCAGGATTGTTCAGA
TAGATTTGAGGATTTACATGTGACTTCATTTAAGCATCTTGAAAAAGTGAAATCAAGAGC
AAGGCTAGGAAGGAGCCCAGATGACAGCCATAATCACTTAAAATGTACTACAAGACCATA
TACTGCTCCAGAGATTAACAAACGAGGAGAAAGCTATACTGGAAAATTTAAAAGTCCTCG
AATGGTTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGTATGAAAATTTAAATATCACTAATAGCATAGATGAGTTCATGCAAGATAAGCCCTA
TGGACAGAAAAATACAAATAGAAAAGGAAAATCAGTGGCTTTTTCACCAAAAGAATATAT
TTCACCATCTTTCAGTCCAGAATATATAGAATTCAAACCAAACTATCAGGATTGTTCAGA
TAGATTTGAGGATTTACATGTGACTTCATTTAAGCATCTTGAAAAAGTGAAATCAAGAGC
AAGGCTAGGAAGGAGCCCAGATGACAGCCATAATCACTTAAAATGTACTACAAGACCATA
TACTGCTCCAGAGATTAACAAACGAGGAGAAAGCTATACTGGAAAATTTAAAAGTCCTCG
AATGGTTTCA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               168-370, gnl|bosTau2|chr2 (52601306-52601101)
               

               
               168-370, gnl|canFam2|chr37 (13572239-13572555)
               

               
               168-370, gnl|dasNov1|scaffold_5858 (13896-13578)
               

               
               168-370, gnl|echTel1|scaffold_265432 (763-1138)
               

               
               168-370, gnl|hg17|chr2 (202177884-202178248)
               

               
               168-370, gnl|Hg17|chr2 (202178133-202177925)
               

               
               168-370, gnl|mm7|chr1 (59248518-59248832)
               

               
               168-370, gnl|Mm7|chr1 (59248761-59248556)
               

               
               168-370, gnl|monDom2|scaffold_64 (9829473-9829824)
               

               
               168-370, gnl|oryCun1|scaffold_177402 (43568-43895)
               

               
               168-370, gnl|rheMac2|chr12 (65239931-65240295)
               

               
               168-370, gnl|rn3|chr9 (57708875-57709189)

Aligned organism(s): 12 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-370, gnl|bosTau2|chr2 (52601306-52601101)
               

               
               168-370, gnl|canFam2|chr37 (13572239-13572555)
               

               
               168-370, gnl|dasNov1|scaffold_5858 (13896-13578)
               

               
               168-370, gnl|echTel1|scaffold_265432 (763-1138)
               

               
               168-370, gnl|hg17|chr2 (202177884-202178248)
               

               
               168-370, gnl|Hg17|chr2 (202178133-202177925)
               

               
               168-370, gnl|mm7|chr1 (59248518-59248832)
               

               
               168-370, gnl|Mm7|chr1 (59248761-59248556)
               

               
               168-370, gnl|monDom2|scaffold_64 (9829473-9829824)
               

               
               168-370, gnl|oryCun1|scaffold_177402 (43568-43895)
               

               
               168-370, gnl|rheMac2|chr12 (65239931-65240295)
               

               
               168-370, gnl|rn3|chr9 (57708875-57709189)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.207814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	168-370, gnl\|bosTau2\|chr2 (52601306-52601101)
	168-370, gnl\|canFam2\|chr37 (13572239-13572555)
	168-370, gnl\|dasNov1\|scaffold_5858 (13896-13578)
	168-370, gnl\|echTel1\|scaffold_265432 (763-1138)
	168-370, gnl\|hg17\|chr2 (202177884-202178248)
	168-370, gnl\|Hg17\|chr2 (202178133-202177925)
	168-370, gnl\|mm7\|chr1 (59248518-59248832)
	168-370, gnl\|Mm7\|chr1 (59248761-59248556)
	168-370, gnl\|monDom2\|scaffold_64 (9829473-9829824)
	168-370, gnl\|oryCun1\|scaffold_177402 (43568-43895)
	168-370, gnl\|rheMac2\|chr12 (65239931-65240295)
	168-370, gnl\|rn3\|chr9 (57708875-57709189)