Non-Coding RNA Search

rtes02_o17.y1

Sequence:


               
               CTGAAGTCAAGGCTGTGTTCTGAGGCCTGGATGAGCTTGTCTGACCAGAAGAGGTGCCTG
GAGGTCTGGACACGGATGGAGCGATGGTCGGGGGACAACACCTTTTCCTCCTCTGCGAAA
CCCAGAACCAGCCAGATGTACGTCTGATCTTTCGTCTGTTCACCCTAAAATGACATCTGC
CAGGTAACAGGCTCCTGCAGTCACAGGCTCCCAATCAGCTTTTTATAATTTCACTCTTAC
ACACGGACAACCAAACATCACCAGGCATTTGAAGAAGCTGCCAACATGGGAGTGACAGAC
CAAGAGAAAAGATCACTCCAGTGCAGCAGAGGTAATCTGAGAAATAGAGGACCCCTTAAA
AACTGTGATCATCTTCAGAGATTCAGAGGTGAAGATATTCAACAACATATACTGCATCCA
AAAAAGAGGGGCCTACCTGTGAGCAAAGACTTCCCCAGGCCGTCGGGTTGAAGGCACACA
GCATGGCCGAAGTCGCAGAGGGCTGCGCGGCTCCCATCGCTGGACAGGAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAAGTCAAGGCTGTGTTCTGAGGCCTGGATGAGCTTGTCTGACCAGAAGAGGTGCCTG
GAGGTCTGGACACGGATGGAGCGATGGTCGGGGGACAACACCTTTTCCTCCTCTGCGAAA
CCCAGAACCAGCCAGATGTACGTCTGATCTTTCGTCTGTTCACCCTAAAATGACATCTGC
CAGGTAACAGGCTCCTGCAGTCACAGGCTCCCAATCAGCTTTTTATAATTTCACTCTTAC
ACACGGACAACCAAACATCACCAGGCATTTGAAGAAGCTGCCAACATGGGAGTGACAGAC
CAAGAGAAAAGATCACTCCAGTGCAGCAGAGGTAATCTGAGAAATAGAGGACCCCTTAAA
AACTGTGATCATCTTCAGAGATTCAGAGGTGAAGATATTCAACAACATATACTGCATCCA
AAAAAGAGGGGCCTACCTGTGAGCAAAGACTTCCCCAGGCCGTCGGGTTGAAGGCACACA
GCATGGCCGAAGTCGCAGAGGGCTGCGCGGCTCCCATCGCTGGACAGGAGCA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               126-425, gnl|bosTau2|chr19 (37114349-37114058)
               


               
               429-532, gnl|bosTau2|chr19 (37099328-37099225)
               

               
               429-532, gnl|Hg17|chr17 (40706645-40706748)
               

               
               429-532, gnl|Mm7|chr11 (103339364-103339468)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-425, gnl|bosTau2|chr19 (37114349-37114058)
               


               
               429-532, gnl|bosTau2|chr19 (37099328-37099225)
               

               
               429-532, gnl|Hg17|chr17 (40706645-40706748)
               

               
               429-532, gnl|Mm7|chr11 (103339364-103339468)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	126-425, gnl\|bosTau2\|chr19 (37114349-37114058)

	429-532, gnl\|bosTau2\|chr19 (37099328-37099225)
	429-532, gnl\|Hg17\|chr17 (40706645-40706748)
	429-532, gnl\|Mm7\|chr11 (103339364-103339468)