Non-Coding RNA Search

rtes03_c3.y1

Sequence:


               
               GTTCTTTGAAGGATTTCCTGCACGATACTGGCTCCCAGCTTTCTTCTTTCCACAAGCCTT
TCTCATCTCGGTTCTCCAAGACTATGGAAGGGCCCAAGGAATCTCTACAGACGCCCTCAC
TTTTACCCACCACGTGATCTCTGAGCCCACTGACCTCAAAGACGACGAGTTCTCCGTCAT
CATCCAGAAGAAACTCAACATAGTCAGGAGAGCCTTTAAGGGCATGGACCCCACACACAA
TGGAGTTCACATCTTTGGTTTATTCATTGAGGGGGCAAGGTGGAATCATGAAGAAAAAAT
ACTGGAAGACTCGCTGCCTTGTGAGATATGTTGTGATTTTCCTGAAATACACTTCTTGCC
AACAAAGATTTCTACTGAAAGTCCAAATGCTCCCGAGCAGACGGAGTCCGAACTCTACAC
CTTTGAATGCCCAGTCTACCAGACACCTGCAAGGTCAAGGACCTGGACAACTGCTGGCCT
AGCCTCAAACTTTTTAACATCTGTGTATTTATCCACAAAGAAACCTCCTAGTCACTGGAT
CACACTGCAGGTTGCATTGCTGTGTGAGAAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTTTGAAGGATTTCCTGCACGATACTGGCTCCCAGCTTTCTTCTTTCCACAAGCCTT
TCTCATCTCGGTTCTCCAAGACTATGGAAGGGCCCAAGGAATCTCTACAGACGCCCTCAC
TTTTACCCACCACGTGATCTCTGAGCCCACTGACCTCAAAGACGACGAGTTCTCCGTCAT
CATCCAGAAGAAACTCAACATAGTCAGGAGAGCCTTTAAGGGCATGGACCCCACACACAA
TGGAGTTCACATCTTTGGTTTATTCATTGAGGGGGCAAGGTGGAATCATGAAGAAAAAAT
ACTGGAAGACTCGCTGCCTTGTGAGATATGTTGTGATTTTCCTGAAATACACTTCTTGCC
AACAAAGATTTCTACTGAAAGTCCAAATGCTCCCGAGCAGACGGAGTCCGAACTCTACAC
CTTTGAATGCCCAGTCTACCAGACACCTGCAAGGTCAAGGACCTGGACAACTGCTGGCCT
AGCCTCAAACTTTTTAACATCTGTGTATTTATCCACAAAGAAACCTCCTAGTCACTGGAT
CACACTGCAGGTTGCATTGCTGTGTGAGAAGGA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               44-228, gnl|bosTau2|chr16 (16900467-16900284)
               

               
               44-228, gnl|canFam2|chr7 (42286364-42286133)
               

               
               44-228, gnl|echTel1|scaffold_186731 (3288-2963)
               

               
               44-228, gnl|hg17|chr1 (221886613-221886920)
               

               
               44-228, gnl|Hg17|chr1 (221886716-221886896)
               

               
               44-228, gnl|loxAfr1|scaffold_21906 (16823-16496)
               

               
               44-228, gnl|mm7|chr1 (181792799-181793113)
               

               
               44-228, gnl|Mm7|chr1 (181792907-181793089)
               

               
               44-228, gnl|oryCun1|scaffold_202447 (381377-381076)
               

               
               44-228, gnl|panTro1|chr1 (205699335-205699640)
               

               
               44-228, gnl|rheMac2|chr1 (145002601-145002295)
               

               
               44-228, gnl|rn3|chr13 (97995621-97995924)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-228, gnl|bosTau2|chr16 (16900467-16900284)
               

               
               44-228, gnl|canFam2|chr7 (42286364-42286133)
               

               
               44-228, gnl|echTel1|scaffold_186731 (3288-2963)
               

               
               44-228, gnl|hg17|chr1 (221886613-221886920)
               

               
               44-228, gnl|Hg17|chr1 (221886716-221886896)
               

               
               44-228, gnl|loxAfr1|scaffold_21906 (16823-16496)
               

               
               44-228, gnl|mm7|chr1 (181792799-181793113)
               

               
               44-228, gnl|Mm7|chr1 (181792907-181793089)
               

               
               44-228, gnl|oryCun1|scaffold_202447 (381377-381076)
               

               
               44-228, gnl|panTro1|chr1 (205699335-205699640)
               

               
               44-228, gnl|rheMac2|chr1 (145002601-145002295)
               

               
               44-228, gnl|rn3|chr13 (97995621-97995924)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	44-228, gnl\|bosTau2\|chr16 (16900467-16900284)
	44-228, gnl\|canFam2\|chr7 (42286364-42286133)
	44-228, gnl\|echTel1\|scaffold_186731 (3288-2963)
	44-228, gnl\|hg17\|chr1 (221886613-221886920)
	44-228, gnl\|Hg17\|chr1 (221886716-221886896)
	44-228, gnl\|loxAfr1\|scaffold_21906 (16823-16496)
	44-228, gnl\|mm7\|chr1 (181792799-181793113)
	44-228, gnl\|Mm7\|chr1 (181792907-181793089)
	44-228, gnl\|oryCun1\|scaffold_202447 (381377-381076)
	44-228, gnl\|panTro1\|chr1 (205699335-205699640)
	44-228, gnl\|rheMac2\|chr1 (145002601-145002295)
	44-228, gnl\|rn3\|chr13 (97995621-97995924)