Non-Coding RNA Search

rtes03_f9.y1

Sequence:


               
               TCCCCCATGCCAACTGCCAACAATTAGTTAATTTTATCATACAGACTAGCAGGGGCATCG
AGGGAGACTAATAAAAACATTTGTTGAGTTTATTAAGGAGAAAAGGCTTCAGTTACTTTC
CCCAAAGCACTGTCATTATAGACCAGTGTCTGCCAGGTCATATAAACAGCTTTACTGTAA
AGAATGTTTTCCTTTAAATGGATCTATTGTCATGGGACTTTATCTATCTGAAAAAAACAG
AGATTTATCAGTGAAGAATATAAGAATGGGAAGCTTGTGACTTGTTATCCAGAAGAAAAA
ATTAAAGAGATGTCTTCAATTGGATTAAAATAATCAGAGCTCTACCTGCCCAGGAGTCAC
AGCTCACTTCCAGGGCAGCTCTTTCAATGATGGAAAAGAATCAACAGTGACAGATCCATC
CCAAAAGAACTTTCTCATCATCTCTCAGGTCTGGTGGTAAATCCAACCATAGTGACCACA
TCTACCCACTGGTCTTACTCAGTGGTTATAATGTTTGTGGTGCAATAATTATTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCCCATGCCAACTGCCAACAATTAGTTAATTTTATCATACAGACTAGCAGGGGCATCG
AGGGAGACTAATAAAAACATTTGTTGAGTTTATTAAGGAGAAAAGGCTTCAGTTACTTTC
CCCAAAGCACTGTCATTATAGACCAGTGTCTGCCAGGTCATATAAACAGCTTTACTGTAA
AGAATGTTTTCCTTTAAATGGATCTATTGTCATGGGACTTTATCTATCTGAAAAAAACAG
AGATTTATCAGTGAAGAATATAAGAATGGGAAGCTTGTGACTTGTTATCCAGAAGAAAAA
ATTAAAGAGATGTCTTCAATTGGATTAAAATAATCAGAGCTCTACCTGCCCAGGAGTCAC
AGCTCACTTCCAGGGCAGCTCTTTCAATGATGGAAAAGAATCAACAGTGACAGATCCATC
CCAAAAGAACTTTCTCATCATCTCTCAGGTCTGGTGGTAAATCCAACCATAGTGACCACA
TCTACCCACTGGTCTTACTCAGTGGTTATAATGTTTGTGGTGCAATAATTATTATT

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               4-334, gnl|bosTau2|chr9 (26415231-26414909)
               

               
               4-334, gnl|canFam2|chr12 (66149734-66150399)
               

               
               4-334, gnl|dasNov1|scaffold_14340 (6718-7380)
               

               
               4-334, gnl|hg17|chr6 (106287100-106287754)
               

               
               4-334, gnl|Hg17|chr6 (106287260-106287588)
               

               
               4-334, gnl|loxAfr1|scaffold_12 (107456-108114)
               

               
               4-334, gnl|mm7|chr10 (44576035-44575369)
               

               
               4-334, gnl|Mm7|chr10 (44575847-44575527)
               

               
               4-334, gnl|oryCun1|scaffold_192026 (27341-28034)
               

               
               4-334, gnl|panTro1|chr5 (108435514-108436168)
               

               
               4-334, gnl|rheMac2|chr4 (101757567-101758210)
               

               
               4-334, gnl|rn3|chr20 (48775807-48775170)
               


               
               342-446, gnl|bosTau2|chr9 (26414610-26414506)
               

               
               342-446, gnl|Hg17|chr6 (106287912-106288020)
               

               
               342-446, gnl|Mm7|chr10 (44575212-44575119)

Aligned organism(s): 15 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-334, gnl|bosTau2|chr9 (26415231-26414909)
               

               
               4-334, gnl|canFam2|chr12 (66149734-66150399)
               

               
               4-334, gnl|dasNov1|scaffold_14340 (6718-7380)
               

               
               4-334, gnl|hg17|chr6 (106287100-106287754)
               

               
               4-334, gnl|Hg17|chr6 (106287260-106287588)
               

               
               4-334, gnl|loxAfr1|scaffold_12 (107456-108114)
               

               
               4-334, gnl|mm7|chr10 (44576035-44575369)
               

               
               4-334, gnl|Mm7|chr10 (44575847-44575527)
               

               
               4-334, gnl|oryCun1|scaffold_192026 (27341-28034)
               

               
               4-334, gnl|panTro1|chr5 (108435514-108436168)
               

               
               4-334, gnl|rheMac2|chr4 (101757567-101758210)
               

               
               4-334, gnl|rn3|chr20 (48775807-48775170)
               


               
               342-446, gnl|bosTau2|chr9 (26414610-26414506)
               

               
               342-446, gnl|Hg17|chr6 (106287912-106288020)
               

               
               342-446, gnl|Mm7|chr10 (44575212-44575119)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.207814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	4-334, gnl\|bosTau2\|chr9 (26415231-26414909)
	4-334, gnl\|canFam2\|chr12 (66149734-66150399)
	4-334, gnl\|dasNov1\|scaffold_14340 (6718-7380)
	4-334, gnl\|hg17\|chr6 (106287100-106287754)
	4-334, gnl\|Hg17\|chr6 (106287260-106287588)
	4-334, gnl\|loxAfr1\|scaffold_12 (107456-108114)
	4-334, gnl\|mm7\|chr10 (44576035-44575369)
	4-334, gnl\|Mm7\|chr10 (44575847-44575527)
	4-334, gnl\|oryCun1\|scaffold_192026 (27341-28034)
	4-334, gnl\|panTro1\|chr5 (108435514-108436168)
	4-334, gnl\|rheMac2\|chr4 (101757567-101758210)
	4-334, gnl\|rn3\|chr20 (48775807-48775170)

	342-446, gnl\|bosTau2\|chr9 (26414610-26414506)
	342-446, gnl\|Hg17\|chr6 (106287912-106288020)
	342-446, gnl\|Mm7\|chr10 (44575212-44575119)